RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 TAC3Q9UHF0 121 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 SLC7A8Q9UHI5 535 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 MCM8Q9UJA3 840 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 PCOLCE2Q9UKZ9 415 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 EIF3LQ9Y262 564 aaKnown RBP17.41■□□□□ 0.38
COMMD4-208ENST00000563220 SPTY2D1-AS1A0A0U1RR47 76 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 NDUFS2O75306 463 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 TNFP01375 233 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 CDH1P12830 882 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 PSMB5P28074 263 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 DPP6P42658 865 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 MAD2L1Q13257 205 aaPredicted RBP17.41■□□□□ 0.38
COMMD4-208ENST00000563220 FZD2Q14332 565 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 MED27Q6P2C8 311 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 PGM2L1Q6PCE3 622 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 C16orf89Q6UX73 402 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 WDR60Q8WVS4 1066 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 CMTM7Q96FZ5 175 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 HAUS8Q9BT25 410 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 EFCAB11Q9BUY7 163 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 MAP10Q9P2G4 905 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 ZNF624Q9P2J8 865 aaPredicted RBP17.41■□□□□ 0.38
COMMD4-208ENST00000563220 TRBV23OR9-2A0A075B6M9 112 aa17.4■□□□□ 0.38
COMMD4-208ENST00000563220 A6NCN8 305 aa17.4■□□□□ 0.38
COMMD4-208ENST00000563220 ZNF839A8K0R7 811 aa17.4■□□□□ 0.38
COMMD4-208ENST00000563220 MAGEB17A8MXT2 336 aa17.4■□□□□ 0.38
COMMD4-208ENST00000563220 MRASO14807 208 aa17.4■□□□□ 0.38
COMMD4-208ENST00000563220 SORBS2O94875 1100 aaKnown RBP17.4■□□□□ 0.38
COMMD4-208ENST00000563220 ETHE1O95571 254 aa17.4■□□□□ 0.38
COMMD4-208ENST00000563220 PCNAP12004 261 aa17.4■□□□□ 0.38
COMMD4-208ENST00000563220 PKLRP30613 574 aa17.4■□□□□ 0.38
COMMD4-208ENST00000563220 RAB28P51157 221 aa17.4■□□□□ 0.38
COMMD4-208ENST00000563220 CSTF3Q12996 717 aaKnown RBP17.4■□□□□ 0.38
COMMD4-208ENST00000563220 PTGR1Q14914 329 aa17.4■□□□□ 0.38
COMMD4-208ENST00000563220 USP39Q53GS9 565 aaKnown RBP17.4■□□□□ 0.38
COMMD4-208ENST00000563220 PGAM4Q8N0Y7 254 aa17.4■□□□□ 0.38
COMMD4-208ENST00000563220 LIX1Q8N485 282 aa17.4■□□□□ 0.38
COMMD4-208ENST00000563220 ZNF740Q8NDX6 193 aa17.4■□□□□ 0.38
COMMD4-208ENST00000563220 HUS1BQ8NHY5 278 aa17.4■□□□□ 0.38
COMMD4-208ENST00000563220 SH3KBP1Q96B97 665 aa17.4■□□□□ 0.38
COMMD4-208ENST00000563220 WDR41Q9HAD4 459 aa17.4■□□□□ 0.38
COMMD4-208ENST00000563220 AASDHPPTQ9NRN7 309 aa17.4■□□□□ 0.38
COMMD4-208ENST00000563220 ASIC5Q9NY37 505 aa17.4■□□□□ 0.38
COMMD4-208ENST00000563220 ICKQ9UPZ9 632 aa17.4■□□□□ 0.38
COMMD4-208ENST00000563220 PIPSLA2A3N6 862 aa17.39■□□□□ 0.38
COMMD4-208ENST00000563220 K7ESF4 209 aa17.39■□□□□ 0.38
COMMD4-208ENST00000563220 CFLARO15519 480 aa17.39■□□□□ 0.38
COMMD4-208ENST00000563220 BCKDHAP12694 445 aa17.39■□□□□ 0.38
COMMD4-208ENST00000563220 AMD1P17707 334 aa17.39■□□□□ 0.38
COMMD4-208ENST00000563220 MAOBP27338 520 aa17.39■□□□□ 0.38
COMMD4-208ENST00000563220 CXCL12P48061 93 aa17.39■□□□□ 0.38
COMMD4-208ENST00000563220 POLR2JP52435 117 aaKnown RBP17.39■□□□□ 0.38
COMMD4-208ENST00000563220 RCAN2Q14206 197 aa17.39■□□□□ 0.38
COMMD4-208ENST00000563220 LAYNQ6UX15 382 aa17.39■□□□□ 0.38
COMMD4-208ENST00000563220 C17orf64Q86WR6 236 aa17.39■□□□□ 0.38
COMMD4-208ENST00000563220 FAM129CQ86XR2 697 aa17.39■□□□□ 0.38
COMMD4-208ENST00000563220 LAS2Q8IYD9 372 aa17.39■□□□□ 0.38
COMMD4-208ENST00000563220 TSPEARQ8WU66 669 aa17.39■□□□□ 0.38
COMMD4-208ENST00000563220 VPS33AQ96AX1 596 aa17.39■□□□□ 0.38
COMMD4-208ENST00000563220 SPDL1Q96EA4 605 aa17.39■□□□□ 0.38
COMMD4-208ENST00000563220 KLHDC7BQ96G42 594 aa17.39■□□□□ 0.38
COMMD4-208ENST00000563220 CUEDC1Q9NWM3 386 aaPredicted RBP17.39■□□□□ 0.38
COMMD4-208ENST00000563220 VPS29Q9UBQ0 182 aa17.39■□□□□ 0.38
COMMD4-208ENST00000563220 PACSIN3Q9UKS6 424 aa17.39■□□□□ 0.38
COMMD4-208ENST00000563220 DLGAP4Q9Y2H0 992 aa17.39■□□□□ 0.38
COMMD4-208ENST00000563220 HEBP2Q9Y5Z4 205 aa17.39■□□□□ 0.38
COMMD4-208ENST00000563220 FAM234BA2RU67 622 aa17.39■□□□□ 0.37
COMMD4-208ENST00000563220 ASPDHA6ND91 283 aa17.39■□□□□ 0.37
COMMD4-208ENST00000563220 PDE5AO76074 875 aa17.39■□□□□ 0.37
COMMD4-208ENST00000563220 WNT1P04628 370 aa17.39■□□□□ 0.37
COMMD4-208ENST00000563220 CD27P26842 260 aa17.39■□□□□ 0.37
COMMD4-208ENST00000563220 SLC19A1P41440 591 aa17.39■□□□□ 0.37
COMMD4-208ENST00000563220 KCNK10P57789 538 aa17.39■□□□□ 0.37
COMMD4-208ENST00000563220 PAGE2BQ5JRK9 111 aa17.39■□□□□ 0.37
COMMD4-208ENST00000563220 CACHD1Q5VU97 1274 aa17.39■□□□□ 0.37
COMMD4-208ENST00000563220 RAB42Q8N4Z0 105 aa17.39■□□□□ 0.37
COMMD4-208ENST00000563220 CADM4Q8NFZ8 388 aa17.39■□□□□ 0.37
COMMD4-208ENST00000563220 OR2L8Q8NGY9 312 aa17.39■□□□□ 0.37
COMMD4-208ENST00000563220 GPBAR1Q8TDU6 330 aa17.39■□□□□ 0.37
COMMD4-208ENST00000563220 JPH3Q8WXH2 748 aaPredicted RBP17.39■□□□□ 0.37
COMMD4-208ENST00000563220 APOLD1Q96LR9 279 aa17.39■□□□□ 0.37
COMMD4-208ENST00000563220 CDRT15Q96T59 188 aa17.39■□□□□ 0.37
COMMD4-208ENST00000563220 PCBD2Q9H0N5 130 aa17.39■□□□□ 0.37
COMMD4-208ENST00000563220 BRF2Q9HAW0 419 aa17.39■□□□□ 0.37
COMMD4-208ENST00000563220 TMEM45AQ9NWC5 275 aa17.39■□□□□ 0.37
COMMD4-208ENST00000563220 NDUFAF1Q9Y375 327 aa17.39■□□□□ 0.37
COMMD4-208ENST00000563220 PCDHGA7Q9Y5G6 932 aa17.39■□□□□ 0.37
COMMD4-208ENST00000563220 COLEC10Q9Y6Z7 277 aa17.39■□□□□ 0.37
COMMD4-208ENST00000563220 A0A1W2PP18 115 aa17.38■□□□□ 0.37
COMMD4-208ENST00000563220 BBIP1A8MTZ0 92 aa17.38■□□□□ 0.37
COMMD4-208ENST00000563220 SH3BGRLO75368 114 aa17.38■□□□□ 0.37
COMMD4-208ENST00000563220 CELA2BP08218 269 aaPredicted RBP17.38■□□□□ 0.37
COMMD4-208ENST00000563220 HSD3B1P14060 373 aa17.38■□□□□ 0.37
COMMD4-208ENST00000563220 JAK1P23458 1154 aa17.38■□□□□ 0.37
COMMD4-208ENST00000563220 HSD3B2P26439 372 aa17.38■□□□□ 0.37
COMMD4-208ENST00000563220 ILF3Q12906 894 aaKnown RBP eCLIP17.38■□□□□ 0.37
COMMD4-208ENST00000563220 KPNB1Q14974 876 aaKnown RBP17.38■□□□□ 0.37
COMMD4-208ENST00000563220 KIR3DX1Q9H7L2 352 aa17.38■□□□□ 0.37
COMMD4-208ENST00000563220 NDE1Q9NXR1 346 aa17.38■□□□□ 0.37
COMMD4-208ENST00000563220 ANGPT2O15123 496 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms