RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 PTAR1Q7Z6K3 402 aaPredicted RBP2.53□□□□□ -2
CHD9-207ENST00000562806 PHLDB2Q86SQ0 1253 aa2.53□□□□□ -2
CHD9-207ENST00000562806 CCDC89Q8N998 374 aa2.53□□□□□ -2
CHD9-207ENST00000562806 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.53□□□□□ -2
CHD9-207ENST00000562806 KCTD6Q8NC69 237 aa2.53□□□□□ -2
CHD9-207ENST00000562806 OR4D10Q8NGI6 311 aa2.53□□□□□ -2
CHD9-207ENST00000562806 SLC26A7Q8TE54 656 aa2.53□□□□□ -2
CHD9-207ENST00000562806 SMAP2Q8WU79 429 aaPredicted RBP2.53□□□□□ -2
CHD9-207ENST00000562806 CHURC1Q8WUH1 139 aa2.53□□□□□ -2
CHD9-207ENST00000562806 APOBEC4Q8WW27 367 aaKnown RBP2.53□□□□□ -2
CHD9-207ENST00000562806 METTL21AQ8WXB1 218 aa2.53□□□□□ -2
CHD9-207ENST00000562806 PIGBQ92521 554 aa2.53□□□□□ -2
CHD9-207ENST00000562806 RMDN1Q96DB5 314 aa2.53□□□□□ -2
CHD9-207ENST00000562806 RMDN2Q96LZ7 410 aa2.53□□□□□ -2
CHD9-207ENST00000562806 SPAG5Q96R06 1193 aa2.53□□□□□ -2
CHD9-207ENST00000562806 CDCA3Q99618 268 aaPredicted RBP2.53□□□□□ -2
CHD9-207ENST00000562806 PYGO2Q9BRQ0 406 aa2.53□□□□□ -2
CHD9-207ENST00000562806 TDRD1Q9BXT4 1180 aaKnown RBP2.53□□□□□ -2
CHD9-207ENST00000562806 TXLNGYQ9BZA5 131 aa2.53□□□□□ -2
CHD9-207ENST00000562806 HOXD1Q9GZZ0 328 aa2.53□□□□□ -2
CHD9-207ENST00000562806 SHARPINQ9H0F6 387 aa2.53□□□□□ -2
CHD9-207ENST00000562806 THAP2Q9H0W7 228 aa2.53□□□□□ -2
CHD9-207ENST00000562806 SDCBP2Q9H190 292 aa2.53□□□□□ -2
CHD9-207ENST00000562806 UPF3AQ9H1J1 476 aaKnown RBP2.53□□□□□ -2
CHD9-207ENST00000562806 ACTL8Q9H568 366 aa2.53□□□□□ -2
CHD9-207ENST00000562806 TEX10Q9NXF1 929 aaPredicted RBP2.53□□□□□ -2
CHD9-207ENST00000562806 PRDM4Q9UKN5 801 aa2.53□□□□□ -2
CHD9-207ENST00000562806 WDR83OSQ9Y284 106 aa2.53□□□□□ -2
CHD9-207ENST00000562806 CCL27Q9Y4X3 112 aa2.53□□□□□ -2
CHD9-207ENST00000562806 LOC105371242A0A075B767 164 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 CASTOR2A6NHX0 329 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 A8MXE2 369 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 CCDC188H7C350 402 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 P4HA2O15460 535 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 MAGEC1O60732 1142 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 PSMD10O75832 226 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 SORBS2O94875 1100 aaKnown RBP2.52□□□□□ -2.01
CHD9-207ENST00000562806 CELF2O95319 508 aaKnown RBP2.52□□□□□ -2.01
CHD9-207ENST00000562806 GGPS1O95749 300 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 TBX6O95947 436 aaPredicted RBP2.52□□□□□ -2.01
CHD9-207ENST00000562806 DARSP14868 501 aaKnown RBP2.52□□□□□ -2.01
CHD9-207ENST00000562806 RPL35AP18077 110 aaKnown RBP2.52□□□□□ -2.01
CHD9-207ENST00000562806 EPORP19235 508 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 CD22P20273 847 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 CYP2A7P20853 494 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 PRKACGP22612 351 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 CPT2P23786 658 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 ELAVL4P26378 380 aaKnown RBP2.52□□□□□ -2.01
CHD9-207ENST00000562806 HSPA4P34932 840 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 MMP12P39900 470 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 TAF6P49848 677 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 DNA2P51530 1060 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 CLDN15P56746 228 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 NUCB1Q02818 461 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 ACSM1Q08AH1 577 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 DRP2Q13474 957 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 OPCMLQ14982 345 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 RASA2Q15283 850 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 PTPN14Q15678 1187 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 TAF1BQ53T94 588 aaPredicted RBP2.52□□□□□ -2.01
CHD9-207ENST00000562806 XKR3Q5GH77 459 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 SLC25A53Q5H9E4 307 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 ENPP7Q6UWV6 458 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 LEKR1Q6ZMV7 388 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 ZER1Q7Z7L7 766 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 TLK2Q86UE8 772 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 AMIGO1Q86WK6 493 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 ZNF843Q8N446 348 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 LSMEM1Q8N8F7 131 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 SLC37A3Q8NCC5 494 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 KCNE4Q8WWG9 221 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 SEPT1Q8WYJ6 367 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 TAF15Q92804 592 aaKnown RBP eCLIP2.52□□□□□ -2.01
CHD9-207ENST00000562806 EXT2Q93063 718 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 TSACCQ96A04 125 aaPredicted RBP2.52□□□□□ -2.01
CHD9-207ENST00000562806 SPSB1Q96BD6 273 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 IWS1Q96ST2 819 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 CABLES2Q9BTV7 478 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 FN3KQ9H479 309 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 XAB2Q9HCS7 855 aaKnown RBP2.52□□□□□ -2.01
CHD9-207ENST00000562806 NDE1Q9NXR1 346 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 IL36AQ9UHA7 158 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 ASIC3Q9UHC3 531 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 PPP2R2CQ9Y2T4 447 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 MOB4Q9Y3A3 225 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 R4GN57 208 aa2.52□□□□□ -2.01
CHD9-207ENST00000562806 A0A087WUV0 522 aaPredicted RBP2.51□□□□□ -2.01
CHD9-207ENST00000562806 TRBV5-5A0A0J9YX44 114 aa2.51□□□□□ -2.01
CHD9-207ENST00000562806 MPTX1A8MV57 137 aa2.51□□□□□ -2.01
CHD9-207ENST00000562806 UBE2CO00762 179 aa2.51□□□□□ -2.01
CHD9-207ENST00000562806 TFECO14948 347 aaPredicted RBP2.51□□□□□ -2.01
CHD9-207ENST00000562806 PLOD3O60568 738 aa2.51□□□□□ -2.01
CHD9-207ENST00000562806 TADA2AO75478 443 aa2.51□□□□□ -2.01
CHD9-207ENST00000562806 ATP6AP2O75787 350 aa2.51□□□□□ -2.01
CHD9-207ENST00000562806 RECQL5O94762 991 aaPredicted RBP2.51□□□□□ -2.01
CHD9-207ENST00000562806 IGHEP01854 428 aa2.51□□□□□ -2.01
CHD9-207ENST00000562806 AADACP22760 399 aa2.51□□□□□ -2.01
CHD9-207ENST00000562806 BDNFP23560 247 aa2.51□□□□□ -2.01
CHD9-207ENST00000562806 CDC25CP30307 473 aa2.51□□□□□ -2.01
CHD9-207ENST00000562806 MC5RP33032 325 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms