RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 ZNF605Q86T29 641 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 NKAPQ8N5F7 415 aaKnown RBP12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 METTL27Q8N6F8 245 aaPredicted RBP12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 KIF18AQ8NI77 898 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 THAP4Q8WY91 577 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 CABS1Q96KC9 395 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 GBP5Q96PP8 586 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 PLCD4Q9BRC7 762 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 DHRS4Q9BTZ2 278 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 SLC25A18Q9H1K4 315 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 ADNPQ9H2P0 1102 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 RHOJQ9H4E5 214 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 GPAMQ9HCL2 828 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 GEMIN8Q9NWZ8 242 aaKnown RBP12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 ANKMY1Q9P2S6 941 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 PTRH2Q9Y3E5 179 aaKnown RBP12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 ANKRD12Q6UB98 2062 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 LOC105369274A0A096LPK9 316 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 LOC102723532A0A0G2JNH3 316 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 HYKKA2RU49 373 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 CTAGE15A4D2H0 777 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 ARGFXA6NJG6 315 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 CXorf49A8MYA2 514 aaPredicted RBP12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 MKRN2OSH3BPM6 223 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 H7BY64 318 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 DSCR3O14972 297 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 RECKO95980 971 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 GSTA2P09210 222 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 CTAGE8P0CG41 777 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 ZNF37AP17032 561 aaPredicted RBP12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 OTX2P32243 289 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 NAE1Q13564 534 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 YOD1Q5VVQ6 348 aaPredicted RBP12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 ZDHHC24Q6UX98 284 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 FRA10AC1Q70Z53 315 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 RNF44Q7L0R7 432 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 PRICKLE2Q7Z3G6 844 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 CTAGE6Q86UF2 777 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 C17orf64Q86WR6 236 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 RAB43Q86YS6 212 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 CTAGE4Q8IX94 777 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 OR4N4Q8N0Y3 316 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 PPM1NQ8N819 430 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 C9orf43Q8TAL5 461 aaPredicted RBP12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 TSPAN17Q96FV3 270 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 PRAP1Q96NZ9 151 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 CPNE1Q99829 537 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 EGFL8Q99944 293 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 PIEZO2Q9H5I5 2752 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 ZNF71Q9NQZ8 489 aaPredicted RBP12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 ACSS2Q9NR19 701 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 SMYD2Q9NRG4 433 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 MTRF1LQ9UGC7 380 aaKnown RBP12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 KLK4Q9Y5K2 254 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 MAU2Q9Y6X3 613 aa12.41□□□□□ -0.42
CTDSPL2-209ENST00000560620 IGKV1-8A0A0C4DH67 115 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 NPEPPSL1A6NEC2 478 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 H0YGG7 62 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 HAT1O14929 419 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 RFPL1O75677 317 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 TSPAN12O95859 305 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 CAPN1P07384 714 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 ENO2P09104 434 aaPredicted RBP12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 EZRP15311 586 aaKnown RBP12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 CCND1P24385 295 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 STX2P32856 288 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 AP1S2P56377 157 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 TAS2R39P59534 338 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 GPX6P59796 221 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 ARF3P61204 181 aaPredicted RBP12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 ILF2Q12905 390 aaKnown RBP12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 CHAF1BQ13112 559 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 CBLBQ13191 982 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 USP10Q14694 798 aaKnown RBP12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 MUM1Q2TAK8 710 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 KBTBD12Q3ZCT8 623 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 ZNF385CQ66K41 422 aaPredicted RBP12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 CAPN13Q6MZZ7 669 aaPredicted RBP12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 FBXO42Q6P3S6 717 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 TMEM207Q6UWW9 146 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 PAQR7Q86WK9 346 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 PLD3Q8IV08 490 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 CEP97Q8IW35 865 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 CSNK1A1LQ8N752 337 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 ATL1Q8WXF7 558 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 IFT81Q8WYA0 676 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 COL26A1Q96A83 441 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 PYCR2Q96C36 320 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 ABHD17AQ96GS6 310 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 YIPF2Q9BWQ6 316 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 PHACTR1Q9C0D0 580 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 PCBD2Q9H0N5 130 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 CAB39LQ9H9S4 337 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 CUEDC1Q9NWM3 386 aaPredicted RBP12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 CTNNAL1Q9UBT7 734 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 TUBD1Q9UJT1 453 aa12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 MTO1Q9Y2Z2 717 aaKnown RBP12.4□□□□□ -0.42
CTDSPL2-209ENST00000560620 FAM159BA6NKW6 160 aa12.39□□□□□ -0.43
CTDSPL2-209ENST00000560620 B8ZZF3 427 aa12.39□□□□□ -0.43
CTDSPL2-209ENST00000560620 CDC7O00311 574 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms