RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 GPRC5BQ9NZH0 403 aa9.03□□□□□ -0.96
HERC1-206ENST00000559996 TMEM9Q9P0T7 183 aa9.03□□□□□ -0.96
HERC1-206ENST00000559996 PDP2Q9P2J9 529 aa9.03□□□□□ -0.96
HERC1-206ENST00000559996 OPTCQ9UBM4 332 aa9.03□□□□□ -0.96
HERC1-206ENST00000559996 TAC3Q9UHF0 121 aa9.03□□□□□ -0.96
HERC1-206ENST00000559996 RNF11Q9Y3C5 154 aa9.03□□□□□ -0.96
HERC1-206ENST00000559996 PCDHB11Q9Y5F2 797 aa9.03□□□□□ -0.96
HERC1-206ENST00000559996 CPED1A4D0V7 1026 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 ZNF839A8K0R7 811 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 TCP11X1B4DZS4 312 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 H7BY64 318 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 HCRTR1O43613 425 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 KIF1CO43896 1103 aaKnown RBP9.02□□□□□ -0.97
HERC1-206ENST00000559996 LCMT2O60294 686 aaKnown RBP9.02□□□□□ -0.97
HERC1-206ENST00000559996 EDF1O60869 148 aaKnown RBP9.02□□□□□ -0.97
HERC1-206ENST00000559996 SHOX2O60902 331 aaPredicted RBP9.02□□□□□ -0.97
HERC1-206ENST00000559996 DKK1O94907 266 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 OR4F21O95013 312 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 ESRRBO95718 433 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 S100BP04271 92 aaPredicted RBP9.02□□□□□ -0.97
HERC1-206ENST00000559996 C1GALT1C1LP0DN25 315 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 EPB42P16452 691 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 CCND1P24385 295 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 VARSP26640 1264 aaKnown RBP9.02□□□□□ -0.97
HERC1-206ENST00000559996 SERPINB5P36952 375 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 CAPZBP47756 277 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 GABRA4P48169 554 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 LIMK1P53667 647 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 GFERP55789 205 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 NAA20P61599 178 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 CSNK1G2P78368 415 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 CHIT1Q13231 466 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 DOC2AQ14183 400 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 TBCCQ15814 346 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 SLC5A12Q1EHB4 618 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 AASDHQ4L235 1098 aaPredicted RBP9.02□□□□□ -0.97
HERC1-206ENST00000559996 PRAMEF13Q5VWM6 474 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 ATG9BQ674R7 924 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 SPESP1Q6UW49 350 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 NXPE4Q6UWF7 544 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 EFL1Q7Z2Z2 1120 aaKnown RBP9.02□□□□□ -0.97
HERC1-206ENST00000559996 RAB44Q7Z6P3 723 aaPredicted RBP9.02□□□□□ -0.97
HERC1-206ENST00000559996 CUZD1Q86UP6 607 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 PAQR7Q86WK9 346 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 NAXDQ8IW45 347 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 LRRC34Q8IZ02 419 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 ZNF781Q8N8C0 355 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 DCBLD1Q8N8Z6 715 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 Q8N9G6 341 aaPredicted RBP9.02□□□□□ -0.97
HERC1-206ENST00000559996 ZNF740Q8NDX6 193 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 OR6C4Q8NGE1 309 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 IFI44Q8TCB0 444 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 CNDP2Q96KP4 475 aaKnown RBP9.02□□□□□ -0.97
HERC1-206ENST00000559996 C7orf26Q96N11 449 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 PRAP1Q96NZ9 151 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 KCNA7Q96RP8 456 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 MAP3K3Q99759 626 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 CCDC3Q9BQI4 270 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 TRMOQ9BU70 441 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 SARGQ9BW04 601 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 CAPS2Q9BXY5 557 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 TUBB1Q9H4B7 451 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 KCNK13Q9HB14 408 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 PNPOQ9NVS9 261 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 GEMIN8Q9NWZ8 242 aaKnown RBP9.02□□□□□ -0.97
HERC1-206ENST00000559996 KCNK4Q9NYG8 393 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 PILRAQ9UKJ1 303 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 POMT2Q9UKY4 750 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.02□□□□□ -0.97
HERC1-206ENST00000559996 KLHL20Q9Y2M5 609 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 ENTPD2Q9Y5L3 495 aa9.02□□□□□ -0.97
HERC1-206ENST00000559996 OR2A25A4D2G3 310 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 C2orf74A8MZ97 194 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 ISM1B1AKI9 464 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 TMEM233B4DJY2 109 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 CAPN5O15484 640 aaPredicted RBP9.01□□□□□ -0.97
HERC1-206ENST00000559996 KDM1AO60341 852 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 H2AFYO75367 372 aaKnown RBP9.01□□□□□ -0.97
HERC1-206ENST00000559996 JUNP05412 331 aaKnown RBP9.01□□□□□ -0.97
HERC1-206ENST00000559996 EBLN1P0CF75 366 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 CDH1P12830 882 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 PVRP15151 417 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 AMD1P17707 334 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 GNAZP19086 355 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 MPSTP25325 297 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 SERPINB3P29508 390 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 LSP1P33241 339 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 ACADVLP49748 655 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 SEC24CP53992 1094 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 PKNOX1P55347 436 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 SNRPNP63162 240 aaKnown RBP9.01□□□□□ -0.97
HERC1-206ENST00000559996 GPLD1P80108 840 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 ABATP80404 500 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 MEF2AQ02078 507 aaPredicted RBP9.01□□□□□ -0.97
HERC1-206ENST00000559996 ASPHQ12797 758 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 LCP2Q13094 533 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 PLCL1Q15111 1095 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 GGTA1PQ4G0N0 100 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 LIPJQ5W064 366 aa9.01□□□□□ -0.97
HERC1-206ENST00000559996 ATG16L1Q676U5 607 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms