RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 NME5P56597 212 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 GMFBP60983 142 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 GNB1P62873 340 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 SPOCK1Q08629 439 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 HSPB3Q12988 150 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 PDK1Q15118 436 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 TRADDQ15628 312 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 SGCBQ16585 318 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 TAZQ16635 292 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 AARDQ4LEZ3 155 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 FAM98BQ52LJ0 330 aaKnown RBP3.42□□□□□ -1.86
SPG11-218ENST00000559754 ZC2HC1CQ53FD0 456 aaPredicted RBP3.42□□□□□ -1.86
SPG11-218ENST00000559754 C12orf60Q5U649 245 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 LCN10Q6JVE6 187 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 KDELC1Q6UW63 502 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 OLFM4Q6UX06 510 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 NHLRC1Q6VVB1 395 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 PACS1Q6VY07 963 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 RBMS3Q6XE24 437 aaKnown RBP3.42□□□□□ -1.86
SPG11-218ENST00000559754 PPP1R42Q7Z4L9 355 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 KRTAP7-1Q8IUC3 87 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 SIAH3Q8IW03 269 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 ZNF595Q8IYB9 648 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 PM20D2Q8IYS1 436 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 EMC1Q8N766 993 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 SLC4A11Q8NBS3 891 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 DENND6BQ8NEG7 585 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 IPMKQ8NFU5 416 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 TRIM58Q8NG06 486 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 EXD1Q8NHP7 514 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 WDR20Q8TBZ3 569 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 NXNL1Q96CM4 212 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 C5orf30Q96GV9 206 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 SEMA3CQ99985 751 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 KATNB1Q9BVA0 655 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 NT5C3AQ9H0P0 336 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 CHMP1AQ9HD42 196 aaPredicted RBP3.42□□□□□ -1.86
SPG11-218ENST00000559754 SLC52A3Q9NQ40 469 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 PRMT8Q9NR22 394 aaPredicted RBP3.42□□□□□ -1.86
SPG11-218ENST00000559754 EXTL2Q9UBQ6 330 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 DBNLQ9UJU6 430 aaKnown RBP3.42□□□□□ -1.86
SPG11-218ENST00000559754 FBXW2Q9UKT8 454 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 ACEP12821 1306 aa3.42□□□□□ -1.86
SPG11-218ENST00000559754 COL2A1P02458 1487 aaPredicted RBP3.41□□□□□ -1.86
SPG11-218ENST00000559754 A0A0G2JNG1 304 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 SMIM30A4D0T7 59 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 TMEM8BA6NDV4 472 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 TMEM178BH3BS89 294 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 TRIM77I1YAP6 450 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 PTGESO14684 152 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 SLC16A8O95907 504 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 ICAM1P05362 532 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 FAM86B2P0C5J1 330 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 DANCRP0C864 163 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 ARF4P18085 180 aaPredicted RBP3.41□□□□□ -1.86
SPG11-218ENST00000559754 VCLP18206 1134 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 TIA1P31483 386 aaKnown RBP eCLIP3.41□□□□□ -1.86
SPG11-218ENST00000559754 PRPHP41219 470 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 RABIFP47224 123 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 CTSCP53634 463 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 HMGN5P82970 282 aaKnown RBP3.41□□□□□ -1.86
SPG11-218ENST00000559754 LRRC74AQ0VAA2 488 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 GAMTQ14353 236 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 KIR2DS5Q14953 304 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 KRT71Q3SY84 523 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 KLHL26Q53HC5 615 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 SPOUT1Q5T280 376 aaKnown RBP3.41□□□□□ -1.86
SPG11-218ENST00000559754 NEK5Q6P3R8 708 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 ZBTB49Q6ZSB9 765 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 FBXO39Q8N4B4 442 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 CCDC110Q8TBZ0 833 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 ST7LQ8TDW4 575 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 FCAMRQ8WWV6 532 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 PRCCQ92733 491 aaPredicted RBP3.41□□□□□ -1.86
SPG11-218ENST00000559754 SNRNP40Q96DI7 357 aaKnown RBP3.41□□□□□ -1.86
SPG11-218ENST00000559754 OXNAD1Q96HP4 312 aaPredicted RBP3.41□□□□□ -1.86
SPG11-218ENST00000559754 KCNK16Q96T55 309 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 TRPC7Q9HCX4 862 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 C2orf42Q9NWW7 574 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 TAS2R14Q9NYV8 317 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 SPG21Q9NZD8 308 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 POLLQ9UGP5 575 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 FBXL5Q9UKA1 691 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 AURKCQ9UQB9 309 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 TDRKHQ9Y2W6 561 aaKnown RBP3.41□□□□□ -1.86
SPG11-218ENST00000559754 PRSS21Q9Y6M0 314 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 PRAG1Q86YV5 1406 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 ATP8B3O60423 1300 aa3.41□□□□□ -1.86
SPG11-218ENST00000559754 IGKV3D-20A0A0C4DH25 116 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 NR5A2O00482 541 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 CLDN4O14493 209 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 PEX11AO75192 247 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 MED24O75448 989 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 TOMM70O94826 608 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 GH1P01241 217 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 TFAP2AP05549 437 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 GNB3P16520 340 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 FERP16591 822 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 EPORP19235 508 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 ADSSP30520 456 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms