RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 IDH3BO43837 385 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 ALOX5P09917 674 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 ZNF37AP17032 561 aaPredicted RBP10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 IMPDH1P20839 514 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 CCR8P51685 355 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 SLC18A2Q05940 514 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 PTPRRQ15256 657 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 CPTPQ5TA50 214 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 SPESP1Q6UW49 350 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 PHTF2Q8N3S3 785 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 CAMKK1Q8N5S9 505 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 TMIEQ8NEW7 156 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 OR9A1PQ8NGU1 263 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 HTRA1Q92743 480 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 EXOSC8Q96B26 276 aaKnown RBP10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 CHID1Q9BWS9 393 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 WDR12Q9GZL7 423 aaKnown RBP10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 GMEB1Q9Y692 573 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 IGLV3-10A0A075B6K4 115 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 PIP5K1BO14986 540 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 TSC22D2O75157 780 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 TNFRSF4P43489 277 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 STXBP1P61764 594 aaKnown RBP10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 HNRNPKP61978 463 aaKnown RBP eCLIP10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 HERVK_113P63132 956 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 ZC3H12BQ5HYM0 836 aaKnown RBP10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 PLEKHS1Q5SXH7 462 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 USP53Q70EK8 1073 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 PLD6Q8N2A8 252 aaKnown RBP10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 AVL9Q8NBF6 648 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 MDGA1Q8NFP4 955 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 KIAA1191Q96A73 305 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 TAMM41Q96BW9 452 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 TPD52L3Q96J77 140 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 ERVK-6Q9BXR3 956 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 DERL2Q9GZP9 239 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 ADAMTS6Q9UKP5 1117 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 CLDN4O14493 209 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 EGFP01133 1207 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 MT-ND1P03886 318 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 MAGEA8P43361 318 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 HMGCS1Q01581 520 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 ALDH6A1Q02252 535 aaKnown RBP10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 BNIP3Q12983 259 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 SLC9B1Q4ZJI4 515 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 RPS27LQ71UM5 84 aaKnown RBP10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 GJD3Q8N144 294 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 SETD9Q8NE22 299 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 JPH3Q8WXH2 748 aaPredicted RBP10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 PLEKHA8Q96JA3 519 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 MCCC1Q96RQ3 725 aaPredicted RBP10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 PKP2Q99959 881 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 EFCAB11Q9BUY7 163 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 ADI1Q9BV57 179 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 RPS6KB2Q9UBS0 482 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 TMCC3Q9ULS5 477 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 BTBD3Q9Y2F9 522 aa10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 SCN1AP35498 2009 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 COL11A1P12107 1806 aaPredicted RBP10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 LOC100506127A0A0U1RQW1 187 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 PNMA8CA0A1B0GUJ8 204 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 STX16-NPEPL1H3BU86 382 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 J3QRK9 145 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 SNPHO15079 494 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 GPR39O43194 453 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 BUD31P41223 144 aaPredicted RBP10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 RPL34P49207 117 aaKnown RBP10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 BNIP2Q12982 314 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 ADAM15Q13444 863 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 NFE2L1Q14494 772 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 GPNMBQ14956 572 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 TMEM198Q66K66 360 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 BHLHB9Q6PI77 547 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 XKR5Q6UX68 686 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 SLC36A4Q6YBV0 504 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 Q6ZSR6 202 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 TMEM26Q6ZUK4 368 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 THOC6Q86W42 341 aaKnown RBP10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 ZC3H7AQ8IWR0 971 aaKnown RBP10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 PIANPQ8IYJ0 282 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 METTL21AQ8WXB1 218 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 FBXL8Q96CD0 374 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 NUSAP1Q9BXS6 441 aaKnown RBP10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 EBPLQ9BY08 206 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 OXSMQ9NWU1 459 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 ZCWPW2A0A1B0GU75 182 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 PRRT4C9JH25 899 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 BOLA2-SMG1P6H3BVE0 249 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 HOXC11O43248 304 aaPredicted RBP10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 LDB2O43679 373 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 GSTM1P09488 218 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 KIR3DL1P43629 444 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 RAB15P59190 212 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 MYBPC3Q14896 1274 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 TAZQ16635 292 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 KCTD8Q6ZWB6 473 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 SMYD1Q8NB12 490 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 BRINP2Q9C0B6 783 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 TBC1D17Q9HA65 648 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms