RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 CDKL4Q5MAI5 379 aa16.22■□□□□ 0.19
PSEN1-224ENST00000559361 SNAP47Q5SQN1 464 aa16.22■□□□□ 0.19
PSEN1-224ENST00000559361 FHL5Q5TD97 284 aa16.22■□□□□ 0.19
PSEN1-224ENST00000559361 KLHL35Q6PF15 583 aa16.22■□□□□ 0.19
PSEN1-224ENST00000559361 ASB18Q6ZVZ8 466 aa16.22■□□□□ 0.19
PSEN1-224ENST00000559361 UBE2R2Q712K3 238 aaPredicted RBP16.22■□□□□ 0.19
PSEN1-224ENST00000559361 CENPLQ8N0S6 344 aaPredicted RBP16.22■□□□□ 0.19
PSEN1-224ENST00000559361 CYP4X1Q8N118 509 aa16.22■□□□□ 0.19
PSEN1-224ENST00000559361 GOLGA6L1Q8N7Z2 621 aa16.22■□□□□ 0.19
PSEN1-224ENST00000559361 STAG3L4Q8TBR4 150 aa16.22■□□□□ 0.19
PSEN1-224ENST00000559361 ANKRD49Q8WVL7 239 aa16.22■□□□□ 0.19
PSEN1-224ENST00000559361 KIAA1191Q96A73 305 aa16.22■□□□□ 0.19
PSEN1-224ENST00000559361 HIST1H2AHQ96KK5 128 aa16.22■□□□□ 0.19
PSEN1-224ENST00000559361 FERD3LQ96RJ6 166 aa16.22■□□□□ 0.19
PSEN1-224ENST00000559361 SMC6Q96SB8 1091 aa16.22■□□□□ 0.19
PSEN1-224ENST00000559361 HIST1H2AJQ99878 128 aa16.22■□□□□ 0.19
PSEN1-224ENST00000559361 H2AFJQ9BTM1 129 aa16.22■□□□□ 0.19
PSEN1-224ENST00000559361 SIDT1Q9NXL6 827 aaKnown RBP16.22■□□□□ 0.19
PSEN1-224ENST00000559361 TRBV23OR9-2A0A075B6M9 112 aa16.21■□□□□ 0.19
PSEN1-224ENST00000559361 SYCE1LA8MT33 242 aa16.21■□□□□ 0.19
PSEN1-224ENST00000559361 MYO1CO00159 1063 aa16.21■□□□□ 0.19
PSEN1-224ENST00000559361 POLR1CO15160 346 aaPredicted RBP16.21■□□□□ 0.19
PSEN1-224ENST00000559361 GLRA3O75311 464 aa16.21■□□□□ 0.19
PSEN1-224ENST00000559361 AGFG2O95081 481 aa16.21■□□□□ 0.19
PSEN1-224ENST00000559361 PYGBP11216 843 aa16.21■□□□□ 0.19
PSEN1-224ENST00000559361 KRT4P19013 534 aa16.21■□□□□ 0.19
PSEN1-224ENST00000559361 GNLYP22749 145 aa16.21■□□□□ 0.19
PSEN1-224ENST00000559361 CRHR1P34998 444 aa16.21■□□□□ 0.19
PSEN1-224ENST00000559361 CDKL1Q00532 357 aa16.21■□□□□ 0.19
PSEN1-224ENST00000559361 SLC18A2Q05940 514 aa16.21■□□□□ 0.19
PSEN1-224ENST00000559361 ARHGAP19Q14CB8 494 aa16.21■□□□□ 0.19
PSEN1-224ENST00000559361 TMEM26Q6ZUK4 368 aa16.21■□□□□ 0.19
PSEN1-224ENST00000559361 FRA10AC1Q70Z53 315 aa16.21■□□□□ 0.19
PSEN1-224ENST00000559361 CFAP61Q8NHU2 1237 aa16.21■□□□□ 0.19
PSEN1-224ENST00000559361 SSC4DQ8WTU2 575 aa16.21■□□□□ 0.19
PSEN1-224ENST00000559361 SSU72Q9NP77 194 aaKnown RBP16.21■□□□□ 0.19
PSEN1-224ENST00000559361 IGSF5Q9NSI5 407 aa16.21■□□□□ 0.19
PSEN1-224ENST00000559361 PCMTD2Q9NV79 361 aa16.21■□□□□ 0.19
PSEN1-224ENST00000559361 SPATA7Q9P0W8 599 aa16.21■□□□□ 0.19
PSEN1-224ENST00000559361 OARD1Q9Y530 152 aa16.21■□□□□ 0.19
PSEN1-224ENST00000559361 PCDHB3Q9Y5E6 796 aa16.21■□□□□ 0.19
PSEN1-224ENST00000559361 CFAP20Q9Y6A4 193 aaKnown RBP16.21■□□□□ 0.19
PSEN1-224ENST00000559361 ARHGEF33A8MVX0 844 aa16.2■□□□□ 0.18
PSEN1-224ENST00000559361 KERAO60938 352 aa16.2■□□□□ 0.18
PSEN1-224ENST00000559361 VPS4BO75351 444 aa16.2■□□□□ 0.18
PSEN1-224ENST00000559361 RECKO95980 971 aa16.2■□□□□ 0.18
PSEN1-224ENST00000559361 RNF224P0DH78 156 aa16.2■□□□□ 0.18
PSEN1-224ENST00000559361 SHMT2P34897 504 aa16.2■□□□□ 0.18
PSEN1-224ENST00000559361 PPP1R3AQ16821 1122 aa16.2■□□□□ 0.18
PSEN1-224ENST00000559361 SBSNQ6UWP8 590 aa16.2■□□□□ 0.18
PSEN1-224ENST00000559361 SH2D5Q6ZV89 423 aa16.2■□□□□ 0.18
PSEN1-224ENST00000559361 SRRM1Q8IYB3 904 aaKnown RBP16.2■□□□□ 0.18
PSEN1-224ENST00000559361 OR5AR1Q8NGP9 310 aa16.2■□□□□ 0.18
PSEN1-224ENST00000559361 KCTD4Q8WVF5 259 aa16.2■□□□□ 0.18
PSEN1-224ENST00000559361 ATL1Q8WXF7 558 aa16.2■□□□□ 0.18
PSEN1-224ENST00000559361 NCSTNQ92542 709 aa16.2■□□□□ 0.18
PSEN1-224ENST00000559361 CCDC138Q96M89 665 aa16.2■□□□□ 0.18
PSEN1-224ENST00000559361 IQCGQ9H095 443 aaKnown RBP16.2■□□□□ 0.18
PSEN1-224ENST00000559361 TMBIM4Q9HC24 238 aa16.2■□□□□ 0.18
PSEN1-224ENST00000559361 CUEDC1Q9NWM3 386 aaPredicted RBP16.2■□□□□ 0.18
PSEN1-224ENST00000559361 LNPEPQ9UIQ6 1025 aa16.2■□□□□ 0.18
PSEN1-224ENST00000559361 TMCO1Q9UM00 188 aa16.2■□□□□ 0.18
PSEN1-224ENST00000559361 VPS4AQ9UN37 437 aa16.2■□□□□ 0.18
PSEN1-224ENST00000559361 RUVBL2Q9Y230 463 aaKnown RBP16.2■□□□□ 0.18
PSEN1-224ENST00000559361 POLHQ9Y253 713 aa16.2■□□□□ 0.18
PSEN1-224ENST00000559361 CSMD1Q96PZ7 3565 aa16.2■□□□□ 0.18
PSEN1-224ENST00000559361 A0A1W2PPM1 405 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 MATN2O00339 956 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 COPEO14579 308 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 PDGFAP04085 211 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 ANKRD34CP0C6C1 535 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 ZNF28P17035 718 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 TFEBP19484 476 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 DLSTP36957 453 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 HNMTP50135 292 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 RAB28P51157 221 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 PGGT1BP53609 377 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 GPR18Q14330 331 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 PLCL1Q15111 1095 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 AGBL2Q5U5Z8 902 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 ISCA2Q86U28 154 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 APLFQ8IW19 511 aaPredicted RBP16.19■□□□□ 0.18
PSEN1-224ENST00000559361 TCAIMQ8N3R3 496 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 OR52E1Q8NGJ3 308 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 OR9A1PQ8NGU1 263 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 HMGCLL1Q8TB92 370 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 NXNL1Q96CM4 212 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 APOPT1Q96IL0 206 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 SH3GL2Q99962 352 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 MRPL57Q9BQC6 102 aaKnown RBP16.19■□□□□ 0.18
PSEN1-224ENST00000559361 HGH1Q9BTY7 390 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 CENPHQ9H3R5 247 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 OR6C2Q9NZP2 312 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 GRID1Q9ULK0 1009 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 RNF112Q9ULX5 631 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 SEC16AO15027 2179 aa16.19■□□□□ 0.18
PSEN1-224ENST00000559361 NPEPPSL1A6NEC2 478 aa16.18■□□□□ 0.18
PSEN1-224ENST00000559361 AGPSO00116 658 aa16.18■□□□□ 0.18
PSEN1-224ENST00000559361 SEMA7AO75326 666 aa16.18■□□□□ 0.18
PSEN1-224ENST00000559361 ERGP11308 486 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms