RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 CREG1O75629 220 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 RFPL1O75677 317 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 METTL18O95568 372 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 ZBTB11O95625 1053 aaPredicted RBP7.1□□□□□ -1.27
SPG11-213ENST00000558988 PDHA2P29803 388 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 HADHAP40939 763 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 PRLHRP49683 370 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 RPS15P62841 145 aaKnown RBP7.1□□□□□ -1.27
SPG11-213ENST00000558988 KIF5AQ12840 1032 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 GPS2Q13227 327 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 SNX1Q13596 522 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 BOP1Q14137 746 aaKnown RBP7.1□□□□□ -1.27
SPG11-213ENST00000558988 KCTD19Q17RG1 926 aaPredicted RBP7.1□□□□□ -1.27
SPG11-213ENST00000558988 DEFB110Q30KQ9 67 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 PTCHD3Q3KNS1 767 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 BCL7AQ4VC05 210 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 SYTL3Q4VX76 610 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 DENND5AQ6IQ26 1287 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 ZNF449Q6P9G9 518 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 CD300LDQ6UXZ3 194 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 PPP1R21Q6ZMI0 780 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 PRUNE1Q86TP1 453 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 SERPINA9Q86WD7 417 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 LRRC57Q8N9N7 239 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 DNAAF3Q8N9W5 541 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 OR52K1Q8NGK4 314 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 HM13Q8TCT9 377 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 N4BP2L2Q92802 583 aaPredicted RBP7.1□□□□□ -1.27
SPG11-213ENST00000558988 MRFAP1L1Q96HT8 127 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 CCM2Q9BSQ5 444 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 LRRC40Q9H9A6 602 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 COG4Q9H9E3 785 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 VPS37BQ9H9H4 285 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 FANCEQ9HB96 536 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 IRAK4Q9NWZ3 460 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 LUZP4Q9P127 313 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 CIDEBQ9UHD4 219 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 KCND3Q9UK17 655 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 TLK1Q9UKI8 766 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 PLAGL1Q9UM63 463 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 GUCA1BQ9UMX6 200 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 PLAAQ9Y263 795 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 TDRKHQ9Y2W6 561 aaKnown RBP7.1□□□□□ -1.27
SPG11-213ENST00000558988 PCDHB14Q9Y5E9 798 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 HEBP2Q9Y5Z4 205 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 SPTBP11277 2137 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 BTN3A3O00478 584 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 GAS8O95995 478 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 MT-ND3P03897 115 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 KLK3P07288 261 aaPredicted RBP7.09□□□□□ -1.27
SPG11-213ENST00000558988 ST6GAL1P15907 406 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 CYP2A7P20853 494 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 ACRV1P26436 265 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 NDUFS1P28331 727 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 PTPN7P35236 360 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 CASRP41180 1078 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 CCL11P51671 97 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 TERF1P54274 439 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 MLLT10P55197 1068 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 TUBB4BP68371 445 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 CACNG1Q06432 222 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 ABRQ12979 859 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 IL10RAQ13651 578 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 TUBB2AQ13885 445 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 PARP6Q2NL67 630 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 P3H1Q32P28 736 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 SEL1L2Q5TEA6 688 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 ETV3LQ6ZN32 361 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 ASB18Q6ZVZ8 466 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 GAS2L3Q86XJ1 694 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 KMT5CQ86Y97 462 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 PIANPQ8IYJ0 282 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 SYCE1Q8N0S2 351 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 D2HGDHQ8N465 521 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 TEX19Q8NA77 164 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 ACVR1CQ8NER5 493 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 OR52E1Q8NGJ3 308 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 OR5AR1Q8NGP9 310 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 OR6P1Q8NGX9 317 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 DTX3LQ8TDB6 740 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 C1orf54Q8WWF1 131 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 ELMO1Q92556 727 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 TFGQ92734 400 aaPredicted RBP7.09□□□□□ -1.27
SPG11-213ENST00000558988 ZNF501Q96CX3 271 aaPredicted RBP7.09□□□□□ -1.27
SPG11-213ENST00000558988 PPP1R2P1Q96PQ5 205 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 ADOQ96SZ5 270 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 CD180Q99467 661 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 TUBB2BQ9BVA1 445 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 TRIM55Q9BYV6 548 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 RAB33BQ9H082 229 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 CHST8Q9H2A9 424 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 KCND1Q9NSA2 647 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 NLE1Q9NVX2 485 aaPredicted RBP7.09□□□□□ -1.27
SPG11-213ENST00000558988 ACTR10Q9NZ32 417 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 TUBD1Q9UJT1 453 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 SNX7Q9UNH6 387 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 ZNF148Q9UQR1 794 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 ASF1AQ9Y294 204 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 EFR3BQ9Y2G0 817 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 PCDHGB7Q9Y5F8 929 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms