RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 RERGQ96A58 199 aaPredicted RBP20.53■□□□□ 0.88
CRNDE-205ENST00000558952 COL26A1Q96A83 441 aa20.53■□□□□ 0.88
CRNDE-205ENST00000558952 CABS1Q96KC9 395 aa20.53■□□□□ 0.88
CRNDE-205ENST00000558952 CCDC138Q96M89 665 aa20.53■□□□□ 0.88
CRNDE-205ENST00000558952 CCDC177Q9NQR7 707 aaPredicted RBP20.53■□□□□ 0.88
CRNDE-205ENST00000558952 GPR83Q9NYM4 423 aa20.53■□□□□ 0.88
CRNDE-205ENST00000558952 NXT1Q9UKK6 140 aaKnown RBP20.53■□□□□ 0.88
CRNDE-205ENST00000558952 TLN1Q9Y490 2541 aaKnown RBP20.53■□□□□ 0.88
CRNDE-205ENST00000558952 H0YGG7 62 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 CEACAM4O75871 244 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 ONECUT2O95948 504 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 HIST1H2AGP0C0S8 130 aaPredicted RBP20.52■□□□□ 0.88
CRNDE-205ENST00000558952 EZRP15311 586 aaKnown RBP20.52■□□□□ 0.88
CRNDE-205ENST00000558952 HIST1H2ADP20671 130 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 ITGAXP20702 1163 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 IMPA1P29218 277 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 OR1D4P47884 311 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 CDKN2DP55273 166 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 ARF3P61204 181 aaPredicted RBP20.52■□□□□ 0.88
CRNDE-205ENST00000558952 PDIA2Q13087 525 aaKnown RBP20.52■□□□□ 0.88
CRNDE-205ENST00000558952 STEAP4Q687X5 459 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 FAM45BPQ6NSW5 357 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 PRMT9Q6P2P2 845 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 ANKMY2Q8IV38 441 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 FDCSPQ8NFU4 85 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 FAM45AQ8TCE6 357 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.52■□□□□ 0.88
CRNDE-205ENST00000558952 NACC2Q96BF6 587 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 LINGO1Q96FE5 620 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 HIST1H2AHQ96KK5 128 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 HIST1H2AJQ99878 128 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 H2AFJQ9BTM1 129 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 SLC26A1Q9H2B4 701 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 ZNF304Q9HCX3 659 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 MLXIPLQ9NP71 852 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 P4HTMQ9NXG6 502 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 ZFATQ9P243 1243 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 SLC17A6Q9P2U8 582 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 MAU2Q9Y6X3 613 aa20.52■□□□□ 0.88
CRNDE-205ENST00000558952 IGKV1-8A0A0C4DH67 115 aa20.51■□□□□ 0.87
CRNDE-205ENST00000558952 SLC16A5O15375 505 aa20.51■□□□□ 0.87
CRNDE-205ENST00000558952 UMODP07911 640 aa20.51■□□□□ 0.87
CRNDE-205ENST00000558952 CASQ1P31415 396 aa20.51■□□□□ 0.87
CRNDE-205ENST00000558952 IL2P60568 153 aa20.51■□□□□ 0.87
CRNDE-205ENST00000558952 TIAL1Q01085 375 aaKnown RBP eCLIP20.51■□□□□ 0.87
CRNDE-205ENST00000558952 NKG7Q16617 165 aa20.51■□□□□ 0.87
CRNDE-205ENST00000558952 DCAF10Q5QP82 559 aa20.51■□□□□ 0.87
CRNDE-205ENST00000558952 ZNF425Q6IV72 752 aa20.51■□□□□ 0.87
CRNDE-205ENST00000558952 TRMT10BQ6PF06 316 aaKnown RBP20.51■□□□□ 0.87
CRNDE-205ENST00000558952 COX15Q7KZN9 410 aa20.51■□□□□ 0.87
CRNDE-205ENST00000558952 CSNK1A1LQ8N752 337 aa20.51■□□□□ 0.87
CRNDE-205ENST00000558952 FBXO36Q8NEA4 188 aa20.51■□□□□ 0.87
CRNDE-205ENST00000558952 PCBD2Q9H0N5 130 aa20.51■□□□□ 0.87
CRNDE-205ENST00000558952 PARVBQ9HBI1 364 aa20.51■□□□□ 0.87
CRNDE-205ENST00000558952 PLAC1Q9HBJ0 212 aa20.51■□□□□ 0.87
CRNDE-205ENST00000558952 STOX2Q9P2F5 926 aaPredicted RBP20.51■□□□□ 0.87
CRNDE-205ENST00000558952 CDC23Q9UJX2 597 aa20.51■□□□□ 0.87
CRNDE-205ENST00000558952 ADAMTS6Q9UKP5 1117 aa20.51■□□□□ 0.87
CRNDE-205ENST00000558952 CDC14AQ9UNH5 594 aa20.51■□□□□ 0.87
CRNDE-205ENST00000558952 SNX24Q9Y343 169 aa20.51■□□□□ 0.87
CRNDE-205ENST00000558952 HELZ2Q9BYK8 2649 aaKnown RBP20.51■□□□□ 0.87
CRNDE-205ENST00000558952 SPTA1P02549 2419 aa20.51■□□□□ 0.87
CRNDE-205ENST00000558952 TXNDC9O14530 226 aa20.5■□□□□ 0.87
CRNDE-205ENST00000558952 FANCGO15287 622 aa20.5■□□□□ 0.87
CRNDE-205ENST00000558952 PRPF4O43172 522 aaKnown RBP eCLIP20.5■□□□□ 0.87
CRNDE-205ENST00000558952 KLHL41O60662 606 aa20.5■□□□□ 0.87
CRNDE-205ENST00000558952 HRH2P25021 359 aa20.5■□□□□ 0.87
CRNDE-205ENST00000558952 RPL21P46778 160 aaKnown RBP20.5■□□□□ 0.87
CRNDE-205ENST00000558952 EMP3P54852 163 aa20.5■□□□□ 0.87
CRNDE-205ENST00000558952 FOXL2P58012 376 aa20.5■□□□□ 0.87
CRNDE-205ENST00000558952 TBPL1P62380 186 aa20.5■□□□□ 0.87
CRNDE-205ENST00000558952 RELAQ04206 551 aa20.5■□□□□ 0.87
CRNDE-205ENST00000558952 OCA2Q04671 838 aa20.5■□□□□ 0.87
CRNDE-205ENST00000558952 CALCOCO2Q13137 446 aa20.5■□□□□ 0.87
CRNDE-205ENST00000558952 FRG1Q14331 258 aaKnown RBP20.5■□□□□ 0.87
CRNDE-205ENST00000558952 HECTD2Q5U5R9 776 aa20.5■□□□□ 0.87
CRNDE-205ENST00000558952 PRAMEF13Q5VWM6 474 aa20.5■□□□□ 0.87
CRNDE-205ENST00000558952 MAATS1Q7Z4T9 603 aa20.5■□□□□ 0.87
CRNDE-205ENST00000558952 PPP1R32Q7Z5V6 425 aa20.5■□□□□ 0.87
CRNDE-205ENST00000558952 HPS6Q86YV9 775 aa20.5■□□□□ 0.87
CRNDE-205ENST00000558952 LRRC56Q8IYG6 542 aaPredicted RBP20.5■□□□□ 0.87
CRNDE-205ENST00000558952 VPS50Q96JG6 964 aa20.5■□□□□ 0.87
CRNDE-205ENST00000558952 WDR83Q9BRX9 315 aaKnown RBP20.5■□□□□ 0.87
CRNDE-205ENST00000558952 NUDT9Q9BW91 350 aa20.5■□□□□ 0.87
CRNDE-205ENST00000558952 SOX17Q9H6I2 414 aaPredicted RBP20.5■□□□□ 0.87
CRNDE-205ENST00000558952 CTSFQ9UBX1 484 aa20.5■□□□□ 0.87
CRNDE-205ENST00000558952 PDE10AQ9Y233 779 aa20.5■□□□□ 0.87
CRNDE-205ENST00000558952 VWA7Q9Y334 891 aa20.5■□□□□ 0.87
CRNDE-205ENST00000558952 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.5■□□□□ 0.87
CRNDE-205ENST00000558952 FAM187AA6NFU0 413 aa20.49■□□□□ 0.87
CRNDE-205ENST00000558952 AGPSO00116 658 aa20.49■□□□□ 0.87
CRNDE-205ENST00000558952 DPM1O60762 260 aa20.49■□□□□ 0.87
CRNDE-205ENST00000558952 FBLP22087 321 aaKnown RBP20.49■□□□□ 0.87
CRNDE-205ENST00000558952 MMP11P24347 488 aa20.49■□□□□ 0.87
CRNDE-205ENST00000558952 MGAT5Q09328 741 aa20.49■□□□□ 0.87
CRNDE-205ENST00000558952 RAPSNQ13702 412 aa20.49■□□□□ 0.87
CRNDE-205ENST00000558952 PRTGQ2VWP7 1150 aa20.49■□□□□ 0.87
CRNDE-205ENST00000558952 AGTRAPQ6RW13 159 aa20.49■□□□□ 0.87
CRNDE-205ENST00000558952 SPATA4Q8NEY3 305 aa20.49■□□□□ 0.87
CRNDE-205ENST00000558952 C10orf90Q96M02 699 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms