RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 OR2AJ1Q8NGZ0 328 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 TLCD1Q96CP7 247 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 PFDN5Q99471 154 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 ZNF395Q9H8N7 513 aaPredicted RBP13.64□□□□□ -0.23
SPG11-210ENST00000558319 TARBP1Q13395 1621 aaKnown RBP13.64□□□□□ -0.23
SPG11-210ENST00000558319 USP2O75604 605 aaPredicted RBP13.64□□□□□ -0.23
SPG11-210ENST00000558319 BDKRB1P46663 353 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 EIF5AP63241 154 aaKnown RBP13.64□□□□□ -0.23
SPG11-210ENST00000558319 TUSC3Q13454 348 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 TEX44Q53QW1 395 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 FBXO22Q8NEZ5 403 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 CASTOR1Q8WTX7 329 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 HERC2P3Q9BVR0 1158 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 MTMR10Q9NXD2 777 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 MOCS1Q9NZB8 636 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 ZNF225Q9UK10 706 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 J3QLW9 94 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 ZNF19P17023 458 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 TPSB2P20231 275 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 CES1P23141 567 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 CLCN2P51788 898 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 CLCN4P51793 760 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 GBX2P52951 348 aaPredicted RBP13.64□□□□□ -0.23
SPG11-210ENST00000558319 TPSAB1Q15661 275 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 RFTN2Q52LD8 501 aaPredicted RBP13.64□□□□□ -0.23
SPG11-210ENST00000558319 CPNE8Q86YQ8 564 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 TMEM192Q8IY95 271 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 OVCA2Q8WZ82 227 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 RABL2AQ9UBK7 228 aaPredicted RBP13.64□□□□□ -0.23
SPG11-210ENST00000558319 PCDHGB3Q9Y5G1 929 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 PTPRUQ92729 1446 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 ARPC4-TTLL3A0A0A6YYG9 625 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 CLIC3O95833 236 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 SLC7A1P30825 629 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 LCP2Q13094 533 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 CCDC58Q4VC31 144 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 RANBP3LQ86VV4 465 aaPredicted RBP13.63□□□□□ -0.23
SPG11-210ENST00000558319 OR13C4Q8NGS5 318 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 HCN3Q9P1Z3 774 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 RPL36Q9Y3U8 105 aaKnown RBP13.63□□□□□ -0.23
SPG11-210ENST00000558319 CLDN4O14493 209 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 NFATC1O95644 943 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 CACNG1Q06432 222 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 LAPTM4AQ15012 233 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 ZNF648Q5T619 568 aaPredicted RBP13.63□□□□□ -0.23
SPG11-210ENST00000558319 BEND4Q6ZU67 534 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 TOP6BLQ8N6T0 577 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 TMEM145Q8NBT3 493 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 MKL1Q969V6 931 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 POLR2J3Q9H1A7 115 aaKnown RBP13.63□□□□□ -0.23
SPG11-210ENST00000558319 GBA3Q9H227 469 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 CYTH4Q9UIA0 394 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 B4GALT2O60909 372 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 TOXO94900 526 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 GGT5P36269 586 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 CRB2Q5IJ48 1285 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 TMEM17Q86X19 198 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 ZNF676Q8N7Q3 588 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 FAM83DQ9H4H8 585 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 MIOSQ9NXC5 875 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 ATXN7L1Q9ULK2 861 aaPredicted RBP13.63□□□□□ -0.23
SPG11-210ENST00000558319 CEMIPQ8WUJ3 1361 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 DIP2BQ9P265 1576 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 M0R233 179 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 TGFB1I1O43294 461 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 LAG3P18627 525 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 CCKBRP32239 447 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 MLLT6P55198 1093 aaPredicted RBP13.63□□□□□ -0.23
SPG11-210ENST00000558319 ZACNQ401N2 412 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 HMGXB4Q9UGU5 601 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 CFL2Q9Y281 166 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 ZNF451Q9Y4E5 1061 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 MAB21L2Q9Y586 359 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 CARNS1A5YM72 827 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 TLR4O00206 839 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 PLD2O14939 933 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 NDUFS4O43181 175 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 IL33O95760 270 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 PRKACGP22612 351 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 PLD5Q8N7P1 536 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 LMX1AQ8TE12 382 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 ARHGEF4Q9NR80 690 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 ZNF358Q9NW07 568 aa13.63□□□□□ -0.23
SPG11-210ENST00000558319 NRXN1Q9ULB1 1477 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 HLA-EP13747 358 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 ZNF20P17024 532 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 ZNF182P17025 639 aaPredicted RBP13.62□□□□□ -0.23
SPG11-210ENST00000558319 HOXB6P17509 224 aaKnown RBP13.62□□□□□ -0.23
SPG11-210ENST00000558319 TUBB3Q13509 450 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 HEPACAMQ14CZ8 416 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 PRPF38BQ5VTL8 546 aaKnown RBP13.62□□□□□ -0.23
SPG11-210ENST00000558319 SMG8Q8ND04 991 aaKnown RBP13.62□□□□□ -0.23
SPG11-210ENST00000558319 MIPEPQ99797 713 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 SLC30A2Q9BRI3 323 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 C1orf109Q9NX04 203 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 ATPIF1Q9UII2 106 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 PTBP2Q9UKA9 531 aaKnown RBP13.62□□□□□ -0.23
SPG11-210ENST00000558319 ILVBLA1L0T0 632 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 INSIG1O15503 277 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms