RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 UBE2R2Q712K3 238 aaPredicted RBP8.34□□□□□ -1.07
USP3-208ENST00000558285 EIF1ADQ8N9N8 165 aaKnown RBP8.34□□□□□ -1.07
USP3-208ENST00000558285 LMNTD1Q8N9Z9 388 aa8.34□□□□□ -1.07
USP3-208ENST00000558285 FBXO36Q8NEA4 188 aa8.34□□□□□ -1.07
USP3-208ENST00000558285 NACC2Q96BF6 587 aa8.34□□□□□ -1.07
USP3-208ENST00000558285 SELENOSQ9BQE4 189 aa8.34□□□□□ -1.07
USP3-208ENST00000558285 TRIM51Q9BSJ1 452 aa8.34□□□□□ -1.07
USP3-208ENST00000558285 HAUS8Q9BT25 410 aa8.34□□□□□ -1.07
USP3-208ENST00000558285 MRPS30Q9NP92 439 aaKnown RBP8.34□□□□□ -1.07
USP3-208ENST00000558285 CCDC177Q9NQR7 707 aaPredicted RBP8.34□□□□□ -1.07
USP3-208ENST00000558285 EURLQ9NYK6 297 aa8.34□□□□□ -1.07
USP3-208ENST00000558285 PLAGL1Q9UM63 463 aa8.34□□□□□ -1.07
USP3-208ENST00000558285 FARSAQ9Y285 508 aaKnown RBP8.34□□□□□ -1.07
USP3-208ENST00000558285 VWA7Q9Y334 891 aa8.34□□□□□ -1.07
USP3-208ENST00000558285 SNX24Q9Y343 169 aa8.34□□□□□ -1.07
USP3-208ENST00000558285 TEX264Q9Y6I9 313 aa8.34□□□□□ -1.07
USP3-208ENST00000558285 KMT2BQ9UMN6 2715 aaPredicted RBP8.33□□□□□ -1.08
USP3-208ENST00000558285 A6NHS1 94 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 HAUS5O94927 633 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 ATP6V1G2O95670 118 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 VIMP08670 466 aaKnown RBP8.33□□□□□ -1.08
USP3-208ENST00000558285 BDKRB1P46663 353 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 RPL21P46778 160 aaKnown RBP8.33□□□□□ -1.08
USP3-208ENST00000558285 RELAQ04206 551 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 GBX1Q14549 363 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 ACSBG2Q5FVE4 666 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 STEAP4Q687X5 459 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 RHBDD2Q6NTF9 364 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 NIPAL1Q6NVV3 410 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 PRMT9Q6P2P2 845 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 FIGLAQ6QHK4 219 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 ADGRD1Q6QNK2 874 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 CDHR3Q6ZTQ4 885 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 CYS1Q717R9 158 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 TAOK1Q7L7X3 1001 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 SPATA21Q7Z572 469 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 TRIM73Q86UV7 250 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 HPS6Q86YV9 775 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 VRK3Q8IV63 474 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 MCATQ8IVS2 390 aaKnown RBP8.33□□□□□ -1.08
USP3-208ENST00000558285 DSELQ8IZU8 1212 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 LKAAEAR1Q8TD35 194 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 ASB11Q8WXH4 323 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 PMEPA1Q969W9 287 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 FAM136AQ96C01 138 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 THAP11Q96EK4 314 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 SLC12A9Q9BXP2 914 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 DPH5Q9H2P9 285 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 PARVBQ9HBI1 364 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 POPDC3Q9HBV1 291 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 IFT80Q9P2H3 777 aaPredicted RBP8.33□□□□□ -1.08
USP3-208ENST00000558285 MAN2B2Q9Y2E5 1009 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 KLK4Q9Y5K2 254 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 AHCTF1Q8WYP5 2266 aa8.33□□□□□ -1.08
USP3-208ENST00000558285 LOC101059948A0A1B0GTJ6 334 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 CDC14CA4D256 554 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 E7ESA3 106 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 PCDH17O14917 1159 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 ZNF749O43361 778 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 NR1D1P20393 614 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 MAGP20916 626 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 IVDP26440 423 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 HPDP32754 393 aaPredicted RBP8.32□□□□□ -1.08
USP3-208ENST00000558285 FOLR3P41439 243 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 MPP1Q00013 466 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 IFT88Q13099 833 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 CBLBQ13191 982 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 UGT8Q16880 541 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 MUM1Q2TAK8 710 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 TEDDM1Q5T9Z0 273 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 KIAA1614Q5VZ46 1190 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 CAPN13Q6MZZ7 669 aaPredicted RBP8.32□□□□□ -1.08
USP3-208ENST00000558285 LRIG3Q6UXM1 1119 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 FRA10AC1Q70Z53 315 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 TIPARPQ7Z3E1 657 aaKnown RBP8.32□□□□□ -1.08
USP3-208ENST00000558285 ADCK2Q7Z695 626 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 STRA8Q7Z7C7 330 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 ADAMTSL2Q86TH1 951 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 ANKMY2Q8IV38 441 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 OR2L3Q8NG85 312 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 OR1L3Q8NH93 324 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 CD200R1Q8TD46 325 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 CT55Q8WUE5 264 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 FKBP10Q96AY3 582 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 LINGO1Q96FE5 620 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 FER1L6-AS2Q96M78 137 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 MIPEPQ99797 713 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 CPNE1Q99829 537 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 ZFYVE21Q9BQ24 234 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 RHOJQ9H4E5 214 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 SAYSD1Q9NPB0 183 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 ARL15Q9NXU5 204 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 CTNNAL1Q9UBT7 734 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 IKBKGQ9Y6K9 419 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 A0A1B0GX78 115 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 ARHGEF33A8MVX0 844 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 GFYI3L273 518 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 RAD51CO43502 376 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 RFPL1O75677 317 aa8.32□□□□□ -1.08
USP3-208ENST00000558285 ALBP02768 609 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms