RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 YAP1P46937 504 aaKnown RBP10.21□□□□□ -0.77
TPM1-210ENST00000558264 RPS13P62277 151 aaKnown RBP10.21□□□□□ -0.77
TPM1-210ENST00000558264 CHRNB3Q05901 458 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 ACSM2AQ08AH3 577 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 FXNQ16595 210 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 SPATS1Q496A3 300 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 FAM98BQ52LJ0 330 aaKnown RBP10.21□□□□□ -0.77
TPM1-210ENST00000558264 LRRC23Q53EV4 343 aaPredicted RBP10.21□□□□□ -0.77
TPM1-210ENST00000558264 TMTC4Q5T4D3 741 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 ACSM2BQ68CK6 577 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 XKR5Q6UX68 686 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 VITQ6UXI7 678 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 ZNF621Q6ZSS3 439 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 RTL10Q7L3V2 364 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 STK32CQ86UX6 486 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 RIMKLAQ8IXN7 391 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 CHCHD4Q8N4Q1 142 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 ZNF740Q8NDX6 193 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 TSPAN14Q8NG11 270 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 OR7G3Q8NG95 312 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 SUSD6Q92537 303 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 SH3KBP1Q96B97 665 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 TMIGD2Q96BF3 282 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 SLC47A1Q96FL8 570 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 PANX1Q96RD7 426 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 FAM83CQ9BQN1 747 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 LGR4Q9BXB1 951 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 ANKRD60Q9BZ19 345 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 SPNS1Q9H2V7 528 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 TMEM45AQ9NWC5 275 aa10.21□□□□□ -0.77
TPM1-210ENST00000558264 TRBV5-3A0A0A0MS03 114 aa10.21□□□□□ -0.78
TPM1-210ENST00000558264 EPOPA6NHQ4 379 aa10.21□□□□□ -0.78
TPM1-210ENST00000558264 NOBOXO60393 691 aa10.21□□□□□ -0.78
TPM1-210ENST00000558264 ABCB1P08183 1280 aaPredicted RBP10.21□□□□□ -0.78
TPM1-210ENST00000558264 PABPC4LP0CB38 370 aaKnown RBP10.21□□□□□ -0.78
TPM1-210ENST00000558264 LAMP1P11279 417 aa10.21□□□□□ -0.78
TPM1-210ENST00000558264 FCGR1AP12314 374 aa10.21□□□□□ -0.78
TPM1-210ENST00000558264 PTPN6P29350 595 aa10.21□□□□□ -0.78
TPM1-210ENST00000558264 RPL5P46777 297 aaKnown RBP10.21□□□□□ -0.78
TPM1-210ENST00000558264 C16orf72Q14CZ0 275 aa10.21□□□□□ -0.78
TPM1-210ENST00000558264 LAPTM4AQ15012 233 aa10.21□□□□□ -0.78
TPM1-210ENST00000558264 SMU1Q2TAY7 513 aa10.21□□□□□ -0.78
TPM1-210ENST00000558264 LIPJQ5W064 366 aa10.21□□□□□ -0.78
TPM1-210ENST00000558264 FAM180BQ6P0A1 224 aa10.21□□□□□ -0.78
TPM1-210ENST00000558264 RNF165Q6ZSG1 346 aa10.21□□□□□ -0.78
TPM1-210ENST00000558264 SPRED1Q7Z699 444 aa10.21□□□□□ -0.78
TPM1-210ENST00000558264 RASGRP3Q8IV61 690 aa10.21□□□□□ -0.78
TPM1-210ENST00000558264 MICU2Q8IYU8 434 aa10.21□□□□□ -0.78
TPM1-210ENST00000558264 PAPD5Q8NDF8 572 aaKnown RBP10.21□□□□□ -0.78
TPM1-210ENST00000558264 RMND5BQ96G75 393 aaPredicted RBP10.21□□□□□ -0.78
TPM1-210ENST00000558264 ITCHQ96J02 903 aa10.21□□□□□ -0.78
TPM1-210ENST00000558264 MRPS26Q9BYN8 205 aaKnown RBP10.21□□□□□ -0.78
TPM1-210ENST00000558264 PBX4Q9BYU1 374 aa10.21□□□□□ -0.78
TPM1-210ENST00000558264 KCNH6Q9H252 994 aa10.21□□□□□ -0.78
TPM1-210ENST00000558264 SMURF2Q9HAU4 748 aa10.21□□□□□ -0.78
TPM1-210ENST00000558264 RAD18Q9NS91 495 aa10.21□□□□□ -0.78
TPM1-210ENST00000558264 TDRKHQ9Y2W6 561 aaKnown RBP10.21□□□□□ -0.78
TPM1-210ENST00000558264 GNG14A0A1W2PPG7 69 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 H0YJX3 145 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 UPK1AO00322 258 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 FPGTO14772 594 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 LATO43561 262 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 H6PDO95479 791 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 ZNF682O95780 498 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 TGFB1P01137 390 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 RB1P06400 928 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 RAP2AP10114 183 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 UMPSP11172 480 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 PRKACGP22612 351 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 FCARP24071 287 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 OPRD1P41143 372 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 SEC13P55735 322 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 APOFQ13790 326 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 PON2Q15165 354 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 SHHQ15465 462 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 IRAK1BP1Q5VVH5 260 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 TTC33Q6PID6 262 aaPredicted RBP10.2□□□□□ -0.78
TPM1-210ENST00000558264 ERN2Q76MJ5 926 aaKnown RBP10.2□□□□□ -0.78
TPM1-210ENST00000558264 CHST15Q7LFX5 561 aaPredicted RBP10.2□□□□□ -0.78
TPM1-210ENST00000558264 NRSN1Q8IZ57 195 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 TMEM132CQ8N3T6 1108 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 GOLM1Q8NBJ4 401 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 OR5AR1Q8NGP9 310 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 MTIF3Q9H2K0 278 aaKnown RBP10.2□□□□□ -0.78
TPM1-210ENST00000558264 TMEM245Q9H330 911 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 RMND5AQ9H871 391 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 PRSS16Q9NQE7 514 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 PAPOLBQ9NRJ5 636 aaKnown RBP10.2□□□□□ -0.78
TPM1-210ENST00000558264 PNPLA3Q9NST1 481 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 NFKBIL1Q9UBC1 381 aaPredicted RBP10.2□□□□□ -0.78
TPM1-210ENST00000558264 SLC23A2Q9UGH3 650 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 SERGEFQ9UGK8 458 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 MYRFQ9Y2G1 1151 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 FADS3Q9Y5Q0 445 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 DOCK9Q9BZ29 2069 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 A0A096LPI6 279 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 IGLON5A6NGN9 336 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 H3BNH8 94 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 QSOX1O00391 747 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 CREG1O75629 220 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms