RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 TSC22D4Q9Y3Q8 395 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 MYO15AQ9UKN7 3530 aa11.97□□□□□ -0.49
TPM1-209ENST00000558072 TRIM38O00635 465 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 PPM1DO15297 605 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 HDAC3O15379 428 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 TOX3O15405 576 aaPredicted RBP11.96□□□□□ -0.49
TPM1-209ENST00000558072 SIGLEC6O43699 453 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 PRICKLE3O43900 615 aaPredicted RBP11.96□□□□□ -0.49
TPM1-209ENST00000558072 ULK1O75385 1050 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 WFS1O76024 890 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 FAM107AO95990 144 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 HSD3B1P14060 373 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 JUPP14923 745 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 CKMT2P17540 419 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 HSD3B2P26439 372 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 CAPZBP47756 277 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 SH3BP2P78314 561 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 ILKQ13418 452 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 FASTKQ14296 549 aaKnown RBP11.96□□□□□ -0.49
TPM1-209ENST00000558072 GRHL2Q6ISB3 625 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 MED27Q6P2C8 311 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 SPESP1Q6UW49 350 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 SUSD1Q6UWL2 747 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 MYLK4Q86YV6 388 aaPredicted RBP11.96□□□□□ -0.49
TPM1-209ENST00000558072 PARP9Q8IXQ6 854 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 ADGRF3Q8IZF5 1079 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 GBP7Q8N8V2 638 aaPredicted RBP11.96□□□□□ -0.49
TPM1-209ENST00000558072 LINC01555Q8NAE3 123 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 PPFIBP2Q8ND30 876 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 OR4F6Q8NGB9 312 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 OR2A1Q8NGT9 310 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 RHBDD1Q8TEB9 315 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 ESAMQ96AP7 390 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 ELOVL6Q9H5J4 265 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 XKR8Q9H6D3 395 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 ZBTB26Q9HCK0 441 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 C1GALT1Q9NS00 363 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 RIC8BQ9NVN3 520 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 KLK4Q9Y5K2 254 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 RNF215Q9Y6U7 377 aa11.96□□□□□ -0.49
TPM1-209ENST00000558072 GOLGA8QA0A0J9YX86 632 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 A0A0J9YY10 115 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 A0A1W2PPV9 198 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 SERTM1A2A2V5 107 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 GOLGA8OA6NCC3 632 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 GOLGA8NF8WBI6 632 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 H0YIV9 168 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 SLC28A1O00337 649 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 OR7A17O14581 309 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 TNFSF14O43557 240 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 POLR2CP19387 275 aaPredicted RBP11.95□□□□□ -0.5
TPM1-209ENST00000558072 ALDH4A1P30038 563 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 TRAF3Q13114 568 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 C18orf21Q32NC0 220 aaPredicted RBP11.95□□□□□ -0.5
TPM1-209ENST00000558072 PROX2Q3B8N5 592 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 GKAP1Q5VSY0 366 aaPredicted RBP11.95□□□□□ -0.5
TPM1-209ENST00000558072 CYB5D1Q6P9G0 228 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 WDR74Q6RFH5 385 aaPredicted RBP11.95□□□□□ -0.5
TPM1-209ENST00000558072 SLCO4C1Q6ZQN7 724 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 FAM47EQ6ZV65 393 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 ACAD11Q709F0 780 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 TMPRSS11BQ86T26 416 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 KMT5CQ86Y97 462 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 LSMEM2Q8N112 164 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 ZNF655Q8N720 491 aaPredicted RBP11.95□□□□□ -0.5
TPM1-209ENST00000558072 ANKS4BQ8N8V4 417 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 OR2L3Q8NG85 312 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 OR4K1Q8NGD4 311 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 NEIL2Q969S2 332 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 METTL2AQ96IZ6 378 aaKnown RBP11.95□□□□□ -0.5
TPM1-209ENST00000558072 NSUN5Q96P11 429 aaKnown RBP11.95□□□□□ -0.5
TPM1-209ENST00000558072 OR4K3Q96R72 315 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 SORT1Q99523 831 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 CENPKQ9BS16 269 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 CHRNA10Q9GZZ6 450 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 ZMYND15Q9H091 742 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 SEMA6CQ9H3T2 930 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 PRM3Q9NNZ6 103 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 SLCO1B3Q9NPD5 702 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 ABCF3Q9NUQ8 709 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 FGFR1OP2Q9NVK5 253 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 KLHL14Q9P2G3 628 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 FTSJ1Q9UET6 329 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 POMT2Q9UKY4 750 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 PPT2Q9UMR5 302 aa11.95□□□□□ -0.5
TPM1-209ENST00000558072 IGHV1OR21-1A0A087WYE8 117 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 TRBC2A0A5B9 178 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 CPED1A4D0V7 1026 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 TLCD2A6NGC4 264 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 ANKDD1BA6NHY2 528 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 LRRC14BA6NHZ5 514 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 C4orf47A7E2U8 309 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 BTN3A3O00478 584 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 TXNDC9O14530 226 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 RGS14O43566 566 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 ITM2AO43736 263 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 CHRNGP07510 517 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 EZRP15311 586 aaKnown RBP11.94□□□□□ -0.5
TPM1-209ENST00000558072 UGT2B7P16662 529 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 CDH3P22223 829 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms