RNA–Protein interactions for RNA: ENST00000558014.5

SEMA6D-208, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 6,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-208ENST00000558014 SEC14L5O43304 696 aa13.33□□□□□ -0.27
SEMA6D-208ENST00000558014 PLOD3O60568 738 aa13.33□□□□□ -0.27
SEMA6D-208ENST00000558014 IGFBP5P24593 272 aa13.33□□□□□ -0.27
SEMA6D-208ENST00000558014 MAGEA11P43364 429 aa13.33□□□□□ -0.27
SEMA6D-208ENST00000558014 CXCL12P48061 93 aa13.33□□□□□ -0.27
SEMA6D-208ENST00000558014 PITX1P78337 314 aaPredicted RBP13.33□□□□□ -0.27
SEMA6D-208ENST00000558014 PTCHD3Q3KNS1 767 aa13.33□□□□□ -0.27
SEMA6D-208ENST00000558014 TIMM50Q3ZCQ8 353 aa13.33□□□□□ -0.27
SEMA6D-208ENST00000558014 RBM20Q5T481 1227 aaKnown RBP13.33□□□□□ -0.27
SEMA6D-208ENST00000558014 C12orf40Q86WS4 652 aa13.33□□□□□ -0.27
SEMA6D-208ENST00000558014 TERB1Q8NA31 727 aa13.33□□□□□ -0.27
SEMA6D-208ENST00000558014 PROKR2Q8NFJ6 384 aa13.33□□□□□ -0.27
SEMA6D-208ENST00000558014 MMADHCQ9H3L0 296 aaPredicted RBP13.33□□□□□ -0.27
SEMA6D-208ENST00000558014 FEZF1A0PJY2 475 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 ACVR2AP27037 513 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 CD70P32970 193 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 PNLIPRP1P54315 467 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 SLC35G1Q2M3R5 365 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 OR4F3Q6IEY1 312 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 TMPRSS11AQ6ZMR5 421 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 KBTBD6Q86V97 674 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 TMEM151BQ8IW70 566 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 SLC5A11Q8WWX8 675 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 CCNL2Q96S94 520 aaPredicted RBP13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 TRIM2Q9C040 744 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 TMEM248Q9NWD8 314 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 GALPQ9UBC7 116 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 NOS1APO75052 506 aaPredicted RBP13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 SERINC3Q13530 473 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 SCARB2Q14108 478 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 PTCRAQ6ISU1 281 aaPredicted RBP13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 AGTRAPQ6RW13 159 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 ZDHHC1Q8WTX9 485 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 FOXJ1Q92949 421 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 TBC1D10AQ9BXI6 508 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 PRTFDC1Q9NRG1 225 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 FAM72CH0Y354 149 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 PRAMEF11O60813 436 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 STC2O76061 302 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 MSX1P28360 303 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 OXTRP30559 389 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 TMEM31Q5JXX7 168 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 FAM72AQ5TYM5 149 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 FAM72DQ6L9T8 149 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 FAM72BQ86X60 149 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 OR7A2PQ8NGA2 310 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 GATA5Q9BWX5 397 aaPredicted RBP13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 FBRSL1Q9HCM7 1045 aaKnown RBP13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 ARL8BQ9NVJ2 186 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 COMMD9Q9P000 198 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 RPP14O95059 124 aaKnown RBP13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 HNRNPH3P31942 346 aaKnown RBP13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 NPY5RQ15761 445 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 ERICH5Q6P6B1 374 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 MAMDC4Q6UXC1 1216 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 ATG14Q6ZNE5 492 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 TAS1R1Q7RTX1 841 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 BOLLQ8N9W6 283 aaKnown RBP13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 RAB21Q9UL25 225 aa13.33□□□□□ -0.28
SEMA6D-208ENST00000558014 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 GADD45GO95257 159 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 SYNGR4O95473 234 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 PDHA2P29803 388 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 CLDN2P57739 230 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 ZNF846Q147U1 533 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 EIPR1Q53HC9 387 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 ABRAXAS1Q6UWZ7 409 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 TMIGD1Q6UXZ0 262 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 AMIGO1Q86WK6 493 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 TMEFF1Q8IYR6 380 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 OR9A1PQ8NGU1 263 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 OTUB2Q96DC9 234 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 OR1F2PQ96R84 312 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 HERC2P3Q9BVR0 1158 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 CIB4A0PJX0 185 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 CCNB2O95067 398 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 SHISA6Q6ZSJ9 500 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 GFM1Q96RP9 751 aaKnown RBP13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 DSN1Q9H410 356 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 FAM124BQ9H5Z6 455 aaPredicted RBP13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 ELAC1Q9H777 363 aaKnown RBP13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 ZNF222Q9UK12 451 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 CNMDO75829 334 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 TMEM63AO94886 807 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 HNRNPKP61978 463 aaKnown RBP eCLIP13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 LYSMD4Q5XG99 296 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 DCUN1D3Q8IWE4 304 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 NSMCE3Q96MG7 304 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 TBC1D17Q9HA65 648 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 RARRES3Q9UL19 164 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 RIMKLBQ9ULI2 386 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 PRPS2P11908 318 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 OGDHQ02218 1023 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 BROXQ5VW32 411 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 RIT1Q92963 219 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 CIB1Q99828 191 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 HOPXQ9BPY8 73 aaPredicted RBP13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 EFCAB11Q9BUY7 163 aa13.32□□□□□ -0.28
SEMA6D-208ENST00000558014 CNTN6Q9UQ52 1028 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms