RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 MAP7D3Q8IWC1 876 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 STHQ8IWL8 128 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 DNAJC10Q8IXB1 793 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 ZNF679Q8IYX0 411 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 BMPERQ8N8U9 685 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 FADS6Q8N9I5 356 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 SIDT2Q8NBJ9 832 aaKnown RBP3.59□□□□□ -1.83
TDP1-217ENST00000557782 ACVR1CQ8NER5 493 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 OR2AK2Q8NG84 335 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 OR2T34Q8NGX1 318 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 OR52I2Q8NH67 350 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 WFIKKN2Q8TEU8 576 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 CACTINQ8WUQ7 758 aaKnown RBP3.59□□□□□ -1.83
TDP1-217ENST00000557782 RND1Q92730 232 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 HAS2Q92819 552 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 DAZLQ92904 295 aaKnown RBP3.59□□□□□ -1.83
TDP1-217ENST00000557782 RPGRIP1Q96KN7 1286 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 CNOT6LQ96LI5 555 aaKnown RBP3.59□□□□□ -1.83
TDP1-217ENST00000557782 TSSK2Q96PF2 358 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 PCYT2Q99447 389 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 MTERF1Q99551 399 aaKnown RBP3.59□□□□□ -1.83
TDP1-217ENST00000557782 ZBTB18Q99592 522 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 CMKLR1Q99788 373 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 COQ7Q99807 217 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 POLDIP3Q9BY77 421 aaKnown RBP3.59□□□□□ -1.83
TDP1-217ENST00000557782 MTMR12Q9C0I1 747 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 SLC39A8Q9C0K1 460 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 RAB6CQ9H0N0 254 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 SIRPDQ9H106 197 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 ACTR8Q9H981 624 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 ROPN1Q9HAT0 212 aaPredicted RBP3.59□□□□□ -1.83
TDP1-217ENST00000557782 MRPL17Q9NRX2 175 aaKnown RBP3.59□□□□□ -1.83
TDP1-217ENST00000557782 FAM207AQ9NSI2 230 aaPredicted RBP3.59□□□□□ -1.83
TDP1-217ENST00000557782 B3GAT1Q9P2W7 334 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 TLK1Q9UKI8 766 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 WDR83OSQ9Y284 106 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 YIPF1Q9Y548 306 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 RAI2Q9Y5P3 530 aa3.59□□□□□ -1.83
TDP1-217ENST00000557782 MYH14Q7Z406 1995 aaKnown RBP3.59□□□□□ -1.83
TDP1-217ENST00000557782 OTOL1A6NHN0 477 aaPredicted RBP3.58□□□□□ -1.84
TDP1-217ENST00000557782 CASTOR2A6NHX0 329 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 ANKRD66B4E2M5 251 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 NPIPA3F8WFD2 350 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 MS4A18H0YCH9 400 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 H3BMM5 538 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 J3KR12 359 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 TIMM23O14925 209 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 PLSCR1O15162 318 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 LDB2O43679 373 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 NDUFS7O75251 213 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 ZNF821O75541 412 aaPredicted RBP3.58□□□□□ -1.84
TDP1-217ENST00000557782 BMP10O95393 424 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 WDPCPO95876 746 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 CH25HO95992 272 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 H1F0P07305 194 aaKnown RBP3.58□□□□□ -1.84
TDP1-217ENST00000557782 GNLYP22749 145 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 SSTR1P30872 391 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 ARRB2P32121 409 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 ARHGAP25P42331 645 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 ATP5OP48047 213 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 METAP1P53582 386 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 GHRHRQ02643 423 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 CACNG1Q06432 222 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 CTTNQ14247 550 aaKnown RBP3.58□□□□□ -1.84
TDP1-217ENST00000557782 GK2Q14410 553 aaPredicted RBP3.58□□□□□ -1.84
TDP1-217ENST00000557782 PDIA5Q14554 519 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 R3HDM1Q15032 1099 aaKnown RBP3.58□□□□□ -1.84
TDP1-217ENST00000557782 NONOQ15233 471 aaKnown RBP eCLIP3.58□□□□□ -1.84
TDP1-217ENST00000557782 ZNF284Q2VY69 593 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 AMZ1Q400G9 498 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 USH1GQ495M9 461 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 Q5PR19 223 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 SUSD4Q5VX71 490 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 ARHGAP17Q68EM7 881 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 MIS18BP1Q6P0N0 1132 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 FUT10Q6P4F1 479 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 SLC16A12Q6ZSM3 486 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 TMEM26Q6ZUK4 368 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 ZNF367Q7RTV3 350 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 LRRC70Q7Z2Q7 622 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 GPR141Q7Z602 305 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 NUDT13Q86X67 352 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.58□□□□□ -1.84
TDP1-217ENST00000557782 CERS5Q8N5B7 392 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 TTC9BQ8N6N2 239 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 BCORP1Q8N888 145 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 EIF1ADQ8N9N8 165 aaKnown RBP3.58□□□□□ -1.84
TDP1-217ENST00000557782 MINDY2Q8NBR6 621 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 NOA1Q8NC60 698 aaKnown RBP3.58□□□□□ -1.84
TDP1-217ENST00000557782 ENGASEQ8NFI3 743 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 OR4K1Q8NGD4 311 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 RFT1Q96AA3 541 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 SARAFQ96BY9 339 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 THOC3Q96J01 351 aaKnown RBP3.58□□□□□ -1.84
TDP1-217ENST00000557782 FAM71F1Q96KD3 344 aaPredicted RBP3.58□□□□□ -1.84
TDP1-217ENST00000557782 FAM84BQ96KN1 310 aaPredicted RBP3.58□□□□□ -1.84
TDP1-217ENST00000557782 TOX2Q96NM4 488 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 TAAR6Q96RI8 345 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 TRMT61BQ9BVS5 477 aaKnown RBP3.58□□□□□ -1.84
TDP1-217ENST00000557782 NACAP1Q9BZK3 213 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms