RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 ATG10Q9H0Y0 220 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 MRPL46Q9H2W6 279 aaKnown RBP13.15□□□□□ -0.3
SHMT2-234ENST00000557703 EHD1Q9H4M9 534 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 ALG9Q9H6U8 611 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 LGALS13Q9UHV8 139 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 E7EQ34 232 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 PRAMEF10O60809 474 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 SHBGP04278 402 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 EBLN1P0CF75 366 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 LIPCP11150 499 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 HGFP14210 728 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 KRT15P19012 456 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 ETV5P41161 510 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 GABRA4P48169 554 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 ATP1A2P50993 1020 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 CCR8P51685 355 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 SH3BP2P78314 561 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 DLG1Q12959 904 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 OR4D1Q15615 310 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 FCRL6Q6DN72 434 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 RNF44Q7L0R7 432 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 LRRC70Q7Z2Q7 622 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 PROSER1Q86XN7 944 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 DTX1Q86Y01 620 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 MCATQ8IVS2 390 aaKnown RBP13.14□□□□□ -0.31
SHMT2-234ENST00000557703 C2orf73Q8N5S3 287 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-234ENST00000557703 ESX1Q8N693 406 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 ZNF655Q8N720 491 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-234ENST00000557703 OR4K1Q8NGD4 311 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 MZB1Q8WU39 189 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 ALKBH8Q96BT7 664 aaKnown RBP13.14□□□□□ -0.31
SHMT2-234ENST00000557703 PPM1MQ96MI6 270 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 NRTNQ99748 197 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 C17orf62Q9BQA9 187 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 ACAT2Q9BWD1 397 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 PELI2Q9HAT8 420 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 WWOXQ9NZC7 414 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 CIDEBQ9UHD4 219 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 PILRAQ9UKJ1 303 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 IKZF3Q9UKT9 509 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 GRID1Q9ULK0 1009 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 DYRK1BQ9Y463 629 aa13.14□□□□□ -0.31
SHMT2-234ENST00000557703 SPTBP11277 2137 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 FITM1A5D6W6 292 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 C1QTNF9BB2RNN3 333 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 TMEM150CB9EJG8 249 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 STX16-NPEPL1H3BU86 382 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 STX16O14662 325 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 CPNE3O75131 537 aaKnown RBP13.13□□□□□ -0.31
SHMT2-234ENST00000557703 H2AFYO75367 372 aaKnown RBP13.13□□□□□ -0.31
SHMT2-234ENST00000557703 KATNA1O75449 491 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 OR2B3O76000 313 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 KLK3P07288 261 aaPredicted RBP13.13□□□□□ -0.31
SHMT2-234ENST00000557703 CCNYL3P0C7X3 344 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 C1QTNF9P0C862 333 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 PVRP15151 417 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 TAC1P20366 129 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 HPDP32754 393 aaPredicted RBP13.13□□□□□ -0.31
SHMT2-234ENST00000557703 UCNP55089 124 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 ABHD18Q0P651 414 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 TSTA3Q13630 321 aaPredicted RBP13.13□□□□□ -0.31
SHMT2-234ENST00000557703 GRM7Q14831 915 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 PCBP2Q15366 365 aaKnown RBP eCLIP13.13□□□□□ -0.31
SHMT2-234ENST00000557703 ZIC1Q15915 447 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 CCDC153Q494R4 210 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 TECRLQ5HYJ1 363 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 GARNL3Q5VVW2 1013 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 NIPAL1Q6NVV3 410 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 LRIG3Q6UXM1 1119 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 LRRC69Q6ZNQ3 347 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 TRIM73Q86UV7 250 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 TAX1BP1Q86VP1 789 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 THOC6Q86W42 341 aaKnown RBP13.13□□□□□ -0.31
SHMT2-234ENST00000557703 PAQR7Q86WK9 346 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 TMEM126BQ8IUX1 230 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 NLGN4XQ8N0W4 816 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 IQCKQ8N0W5 287 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 SPATA6LQ8N4H0 392 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 PPFIBP2Q8ND30 876 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 NLGN4YQ8NFZ3 816 aaPredicted RBP13.13□□□□□ -0.31
SHMT2-234ENST00000557703 TTLQ8NG68 377 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 PROKR1Q8TCW9 393 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 ZCCHC14Q8WYQ9 949 aaKnown RBP13.13□□□□□ -0.31
SHMT2-234ENST00000557703 RERGQ96A58 199 aaPredicted RBP13.13□□□□□ -0.31
SHMT2-234ENST00000557703 CCDC126Q96EE4 140 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 SELENOSQ9BQE4 189 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 NLNQ9BYT8 704 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 ULBP3Q9BZM4 244 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 CD244Q9BZW8 370 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 FAM60AQ9NP50 221 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 DNAJC11Q9NVH1 559 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 ARGLU1Q9NWB6 273 aaPredicted RBP13.13□□□□□ -0.31
SHMT2-234ENST00000557703 MKS1Q9NXB0 559 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 TBK1Q9UHD2 729 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 MID2Q9UJV3 735 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 SLC22A14Q9Y267 594 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 SSUH2Q9Y2M2 353 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 WDFY3Q8IZQ1 3526 aa13.13□□□□□ -0.31
SHMT2-234ENST00000557703 ASPMQ8IZT6 3477 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 A0A087WV48 116 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms