RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 PANX3Q96QZ0 392 aa3.2□□□□□ -1.9
FOXN3-217ENST00000557572 NAP1L3Q99457 506 aaPredicted RBP3.2□□□□□ -1.9
FOXN3-217ENST00000557572 H2AFJQ9BTM1 129 aa3.2□□□□□ -1.9
FOXN3-217ENST00000557572 CAPS2Q9BXY5 557 aa3.2□□□□□ -1.9
FOXN3-217ENST00000557572 DCLK3Q9C098 648 aa3.2□□□□□ -1.9
FOXN3-217ENST00000557572 MMP27Q9H306 513 aa3.2□□□□□ -1.9
FOXN3-217ENST00000557572 METTL7AQ9H8H3 244 aa3.2□□□□□ -1.9
FOXN3-217ENST00000557572 SRD5A3Q9H8P0 318 aa3.2□□□□□ -1.9
FOXN3-217ENST00000557572 RNPEPL1Q9HAU8 725 aa3.2□□□□□ -1.9
FOXN3-217ENST00000557572 PIH1D3Q9NQM4 214 aaKnown RBP3.2□□□□□ -1.9
FOXN3-217ENST00000557572 ABHD10Q9NUJ1 306 aa3.2□□□□□ -1.9
FOXN3-217ENST00000557572 UPB1Q9UBR1 384 aa3.2□□□□□ -1.9
FOXN3-217ENST00000557572 POLLQ9UGP5 575 aa3.2□□□□□ -1.9
FOXN3-217ENST00000557572 DDX25Q9UHL0 483 aaKnown RBP3.2□□□□□ -1.9
FOXN3-217ENST00000557572 HACL1Q9UJ83 578 aa3.2□□□□□ -1.9
FOXN3-217ENST00000557572 VPS4AQ9UN37 437 aa3.2□□□□□ -1.9
FOXN3-217ENST00000557572 SNX7Q9UNH6 387 aa3.2□□□□□ -1.9
FOXN3-217ENST00000557572 MRPS2Q9Y399 296 aaKnown RBP3.2□□□□□ -1.9
FOXN3-217ENST00000557572 HEMK1Q9Y5R4 338 aaPredicted RBP3.2□□□□□ -1.9
FOXN3-217ENST00000557572 NCAPD2Q15021 1401 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 KLRF2D3W0D1 207 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 H3BQ06 376 aaPredicted RBP3.19□□□□□ -1.9
FOXN3-217ENST00000557572 PRYO14603 147 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 MEIS2O14770 477 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 ATP2A1O14983 1001 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 CETN3O15182 167 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 SLC16A5O15375 505 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 SEC14L5O43304 696 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 ECI2O75521 394 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 CREG1O75629 220 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 RSL1D1O76021 490 aaKnown RBP3.19□□□□□ -1.9
FOXN3-217ENST00000557572 PPP1R3DO95685 299 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 SERPINC1P01008 464 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 CXCL10P02778 98 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 PGK2P07205 417 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 LINGO3P0C6S8 592 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 UQCRFS1P1P0C7P4 283 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 CCDC172P0C7W6 258 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 STAG3L3P0CL85 134 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 RALAP11233 206 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 G6PDP11413 515 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 IGFBP2P18065 325 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 NR1D1P20393 614 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 MMP8P22894 467 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 KLRC2P26717 231 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 HOXD3P31249 432 aaPredicted RBP3.19□□□□□ -1.9
FOXN3-217ENST00000557572 PCGF2P35227 344 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 MAGEB1P43366 347 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 PDLIM4P50479 330 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 ARSEP51690 589 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 HNRNPFP52597 415 aaKnown RBP3.19□□□□□ -1.9
FOXN3-217ENST00000557572 OAZ1P54368 228 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 MTTPP55157 894 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 SEC61A1P61619 476 aaKnown RBP3.19□□□□□ -1.9
FOXN3-217ENST00000557572 DSC1Q08554 894 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 PTPRCAPQ14761 206 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 ARHGEF6Q15052 776 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 USP41Q3LFD5 358 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 LRIT3Q3SXY7 679 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 BCL7AQ4VC05 210 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 Q5PR19 223 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 GCNT6Q5T4J0 391 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 AP1ARQ63HQ0 302 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 KLC3Q6P597 504 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 CTR9Q6PD62 1173 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 PARM1Q6UWI2 310 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 ZBTB49Q6ZSB9 765 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 GSTA5Q7RTV2 222 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 PRSS45Q7RTY3 260 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 C16orf82Q7Z2V1 217 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 CAMK1DQ8IU85 385 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 ZDHHC21Q8IVQ6 265 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 SIAH3Q8IW03 269 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 DENND6AQ8IWF6 608 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 ZDHHC23Q8IYP9 409 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 FAM9CQ8IZT9 166 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 ARL14EPQ8N8R7 260 aaPredicted RBP3.19□□□□□ -1.9
FOXN3-217ENST00000557572 BHLHE23Q8NDY6 225 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 OR52B4Q8NGK2 314 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 TMEM174Q8WUU8 243 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 RIT1Q92963 219 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 FAM46BQ96A09 425 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 C19orf60Q96EN9 201 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 C11orf24Q96F05 449 aaPredicted RBP3.19□□□□□ -1.9
FOXN3-217ENST00000557572 URB1-AS1Q96HZ7 61 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 OLFM1Q99784 485 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 CCT7Q99832 543 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 SSX3Q99909 188 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 GAL3ST1Q99999 423 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 TUBA1CQ9BQE3 449 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 JPH2Q9BR39 696 aaPredicted RBP3.19□□□□□ -1.9
FOXN3-217ENST00000557572 PIGQQ9BRB3 760 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 ZNF416Q9BWM5 594 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 C1QTNF1Q9BXJ1 281 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 NUF2Q9BZD4 464 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 SPATC1LQ9H0A9 340 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 THAP2Q9H0W7 228 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 PLAC1Q9HBJ0 212 aa3.19□□□□□ -1.9
FOXN3-217ENST00000557572 MKKSQ9NPJ1 570 aaPredicted RBP3.19□□□□□ -1.9
FOXN3-217ENST00000557572 TBC1D13Q9NVG8 400 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms