RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 CFLARO15519 480 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 NDUFS2O75306 463 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 EEDO75530 441 aaKnown RBP12.05□□□□□ -0.48
SHMT2-233ENST00000557529 MYO1DO94832 1006 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 RASGRP1O95267 797 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 PCNAP12004 261 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 CXCR2P25025 360 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 PKLRP30613 574 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 RPS9P46781 194 aaKnown RBP12.05□□□□□ -0.48
SHMT2-233ENST00000557529 CLNS1AP54105 237 aaKnown RBP12.05□□□□□ -0.48
SHMT2-233ENST00000557529 FOXM1Q08050 763 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 ILF3Q12906 894 aaKnown RBP eCLIP12.05□□□□□ -0.48
SHMT2-233ENST00000557529 KPNB1Q14974 876 aaKnown RBP12.05□□□□□ -0.48
SHMT2-233ENST00000557529 USP39Q53GS9 565 aaKnown RBP12.05□□□□□ -0.48
SHMT2-233ENST00000557529 CATSPEREQ5SY80 951 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 DCP2Q8IU60 420 aaKnown RBP12.05□□□□□ -0.48
SHMT2-233ENST00000557529 HID1Q8IV36 788 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 LIX1Q8N485 282 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 OR13H1Q8NG92 308 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 OR2L8Q8NGY9 312 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 MAFAQ8NHW3 353 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-233ENST00000557529 STMN2Q93045 179 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 TSACCQ96A04 125 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-233ENST00000557529 CDRT15Q96T59 188 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 HOPXQ9BPY8 73 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-233ENST00000557529 TPSD1Q9BZJ3 242 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 DPY30Q9C005 99 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 PITHD1Q9GZP4 211 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-233ENST00000557529 KIR3DX1Q9H7L2 352 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 PRM3Q9NNZ6 103 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 SLC52A3Q9NQ40 469 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 PRDM6Q9NQX0 595 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 TAC3Q9UHF0 121 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 ADGRE2Q9UHX3 823 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 RUVBL1Q9Y265 456 aaKnown RBP12.05□□□□□ -0.48
SHMT2-233ENST00000557529 PCDHGA7Q9Y5G6 932 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 STK25O00506 426 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 NPPAP01160 153 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 BCKDHAP12694 445 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 CDH1P12830 882 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 AMD1P17707 334 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 SERPINB1P30740 379 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 ACTR1BP42025 376 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 PIK3CBP42338 1070 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 ZFP36L2P47974 494 aaKnown RBP12.04□□□□□ -0.48
SHMT2-233ENST00000557529 CCR8P51685 355 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 CLDN8P56748 225 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 ACTR3P61158 418 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 ACTR1AP61163 376 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 DDX39BQ13838 428 aaKnown RBP12.04□□□□□ -0.48
SHMT2-233ENST00000557529 PIGGQ5H8A4 983 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 C8orf82Q6P1X6 216 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-233ENST00000557529 RIPOR1Q6ZS17 1223 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 RETREG3Q86VR2 466 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 PHACTR4Q8IZ21 702 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 CADM4Q8NFZ8 388 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 PJA1Q8NG27 643 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 OR52E1Q8NGJ3 308 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 HUS1BQ8NHY5 278 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 WDR60Q8WVS4 1066 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 RLN3Q8WXF3 142 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 SNX19Q92543 992 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 KLHDC7BQ96G42 594 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 FCRL1Q96LA6 429 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 TEX37Q96LM6 180 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 MTERF1Q99551 399 aaKnown RBP12.04□□□□□ -0.48
SHMT2-233ENST00000557529 AIF1LQ9BQI0 150 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 IER2Q9BTL4 223 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 GSDMCQ9BYG8 508 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 TMEM168Q9H0V1 697 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 ACTL8Q9H568 366 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 SPAG4Q9NPE6 437 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 GPR27Q9NS67 375 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 TBC1D29Q9UFV1 150 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 BCAP29Q9UHQ4 241 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 PPT2Q9UMR5 302 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 SH2B3Q9UQQ2 575 aa12.04□□□□□ -0.48
SHMT2-233ENST00000557529 SPTY2D1-AS1A0A0U1RR47 76 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 A0A1W2PPV9 198 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 OR52A4PA6NMU1 304 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 METTL12A8MUP2 240 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 MAGEB17A8MXT2 336 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 C9JVG2 144 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 TRIM38O00635 465 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 SCAMP1O15126 338 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 PRMT3O60678 531 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 ENTPD5O75356 428 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 PDE5AO76074 875 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 IL6P05231 212 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 THEGLP0DJG4 465 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 ME2P23368 584 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 CD27P26842 260 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 AK4P27144 223 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-233ENST00000557529 IL12AP29459 219 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 HNRNPH1P31943 449 aaKnown RBP12.03□□□□□ -0.48
SHMT2-233ENST00000557529 SHMT2P34897 504 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 BLKP51451 505 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 ABATP80404 500 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 ACSM2AQ08AH3 577 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 PTGR1Q14914 329 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms