RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 DEFB118Q96PH6 123 aa15.83■□□□□ 0.12
SHMT2-232ENST00000557487 FAM193BQ96PV7 902 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-232ENST00000557487 SMIM14Q96QK8 99 aa15.83■□□□□ 0.12
SHMT2-232ENST00000557487 INPP5KQ9BT40 448 aa15.83■□□□□ 0.12
SHMT2-232ENST00000557487 FNDC3AQ9Y2H6 1198 aaKnown RBP15.83■□□□□ 0.12
SHMT2-232ENST00000557487 IFT52Q9Y366 437 aa15.83■□□□□ 0.12
SHMT2-232ENST00000557487 MICAL3Q7RTP6 2002 aa15.83■□□□□ 0.12
SHMT2-232ENST00000557487 B4GALT3O60512 393 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 EPN2O95208 641 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 EN2P19622 333 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-232ENST00000557487 ACRV1P26436 265 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 GDF5P43026 501 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 CTSKP43235 329 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 PTPN5P54829 565 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 TPTEP56180 551 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 RPP38P78345 283 aaKnown RBP15.82■□□□□ 0.12
SHMT2-232ENST00000557487 IL1RL1Q01638 556 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 TWF1Q12792 350 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 NFATC2Q13469 925 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 TOR1AIP1Q5JTV8 583 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 ARMC12Q5T9G4 340 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 LHX8Q68G74 356 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 LAIR1Q6GTX8 287 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 PRR23CQ6ZRP0 262 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 ZZZ3Q8IYH5 903 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 SELENOMQ8WWX9 145 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 SEPT5Q99719 369 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-232ENST00000557487 ALOXE3Q9BYJ1 711 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 ELOVL6Q9H5J4 265 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 KCTD5Q9NXV2 234 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 LHX3Q9UBR4 397 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 PNMA8CA0A1B0GUJ8 204 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 SEPT4O43236 478 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 WBP4O75554 376 aaKnown RBP15.82■□□□□ 0.12
SHMT2-232ENST00000557487 RFPL2O75678 378 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 OXSR1O95747 527 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-232ENST00000557487 PDYNP01213 254 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 S100A5P33763 92 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 C21orf58P58505 322 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 ARF5P84085 180 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 CATSPEREQ5SY80 951 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 RNF219Q5W0B1 726 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-232ENST00000557487 SLC24A5Q71RS6 500 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 DSG4Q86SJ6 1040 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 C10orf111Q8N326 155 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 CLHC1Q8NHS4 586 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 MYO19Q96H55 970 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 FCRL1Q96LA6 429 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 BARD1Q99728 777 aaKnown RBP15.82■□□□□ 0.12
SHMT2-232ENST00000557487 SLX1AQ9BQ83 275 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 COPS4Q9BT78 406 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 ASB8Q9H765 288 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 SACM1LQ9NTJ5 587 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 FAM120CQ9NX05 1096 aaKnown RBP15.82■□□□□ 0.12
SHMT2-232ENST00000557487 THUMPD1Q9NXG2 353 aaKnown RBP15.82■□□□□ 0.12
SHMT2-232ENST00000557487 KLHL3Q9UH77 587 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 PSORS1C1Q9UIG5 152 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 OGDHLQ9ULD0 1010 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 MAPRE3Q9UPY8 281 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 CORO2BQ9UQ03 480 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 RNF6Q9Y252 685 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 DLGAP4Q9Y2H0 992 aa15.82■□□□□ 0.12
SHMT2-232ENST00000557487 SLC38A8A6NNN8 435 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 CLIC1O00299 241 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 SNPHO15079 494 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 ASNA1O43681 348 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 KCNK5O95279 499 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 PGLSO95336 258 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 RPLP0P05388 317 aaKnown RBP15.81■□□□□ 0.12
SHMT2-232ENST00000557487 SDC1P18827 310 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 PPIBP23284 216 aaKnown RBP15.81■□□□□ 0.12
SHMT2-232ENST00000557487 DEFA1P59665 94 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 DEFA3P59666 94 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 OLR1P78380 273 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 CAMK2GQ13555 558 aaPredicted RBP15.81■□□□□ 0.12
SHMT2-232ENST00000557487 SLX4IPQ5VYV7 408 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 ZCCHC8Q6NZY4 707 aaKnown RBP15.81■□□□□ 0.12
SHMT2-232ENST00000557487 AHSA2Q719I0 299 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 SNX29P2Q8IUI4 249 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 CBARPQ8N350 705 aaPredicted RBP15.81■□□□□ 0.12
SHMT2-232ENST00000557487 L3MBTL4Q8NA19 623 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 PROX1Q92786 737 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 RAD9AQ99638 391 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 FKBP14Q9NWM8 211 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 RAPGEFL1Q9UHV5 662 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 MKLN1Q9UL63 735 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 PPT2Q9UMR5 302 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 PRG3Q9Y2Y8 225 aaPredicted RBP15.81■□□□□ 0.12
SHMT2-232ENST00000557487 PCDHB9Q9Y5E1 797 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 PCDHGB3Q9Y5G1 929 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 PEX16Q9Y5Y5 336 aa15.81■□□□□ 0.12
SHMT2-232ENST00000557487 KCNE1BA0A087WTH5 132 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 ZBBXA8MT70 800 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 H7C4K7 107 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 GAPDHSO14556 408 aaPredicted RBP15.8■□□□□ 0.12
SHMT2-232ENST00000557487 LCKP06239 509 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 CDKN2CP42773 168 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 HNMTP50135 292 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 RHOAP61586 193 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 FAM189BP81408 668 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms