RNA–Protein interactions for RNA: ENST00000557092.5

NEDD1-209, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 554 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-209ENST00000557092 TIAL1Q01085 375 aaKnown RBP eCLIP17.59■□□□□ 0.41
NEDD1-209ENST00000557092 PDAP1Q13442 181 aaKnown RBP17.59■□□□□ 0.41
NEDD1-209ENST00000557092 RAPSNQ13702 412 aa17.59■□□□□ 0.41
NEDD1-209ENST00000557092 TEDDM1Q5T9Z0 273 aa17.59■□□□□ 0.41
NEDD1-209ENST00000557092 FBXO42Q6P3S6 717 aa17.59■□□□□ 0.41
NEDD1-209ENST00000557092 TRMT10BQ6PF06 316 aaKnown RBP17.59■□□□□ 0.41
NEDD1-209ENST00000557092 PAQR3Q6TCH7 311 aa17.59■□□□□ 0.41
NEDD1-209ENST00000557092 COX15Q7KZN9 410 aa17.59■□□□□ 0.41
NEDD1-209ENST00000557092 PAQR7Q86WK9 346 aa17.59■□□□□ 0.41
NEDD1-209ENST00000557092 ANKMY2Q8IV38 441 aa17.59■□□□□ 0.41
NEDD1-209ENST00000557092 TMEM151BQ8IW70 566 aa17.59■□□□□ 0.41
NEDD1-209ENST00000557092 DTWD1Q8N5C7 304 aa17.59■□□□□ 0.41
NEDD1-209ENST00000557092 FDCSPQ8NFU4 85 aa17.59■□□□□ 0.41
NEDD1-209ENST00000557092 MCOLN3Q8TDD5 553 aa17.59■□□□□ 0.41
NEDD1-209ENST00000557092 LINGO1Q96FE5 620 aa17.59■□□□□ 0.41
NEDD1-209ENST00000557092 CABS1Q96KC9 395 aa17.59■□□□□ 0.41
NEDD1-209ENST00000557092 WDR83Q9BRX9 315 aaKnown RBP17.59■□□□□ 0.41
NEDD1-209ENST00000557092 PLAC1Q9HBJ0 212 aa17.59■□□□□ 0.41
NEDD1-209ENST00000557092 CCDC177Q9NQR7 707 aaPredicted RBP17.59■□□□□ 0.41
NEDD1-209ENST00000557092 ENAMQ9NRM1 1142 aa17.59■□□□□ 0.41
NEDD1-209ENST00000557092 STOX2Q9P2F5 926 aaPredicted RBP17.59■□□□□ 0.41
NEDD1-209ENST00000557092 ADAMTS6Q9UKP5 1117 aa17.59■□□□□ 0.41
NEDD1-209ENST00000557092 ZNF451Q9Y4E5 1061 aa17.59■□□□□ 0.41
NEDD1-209ENST00000557092 TEX264Q9Y6I9 313 aa17.59■□□□□ 0.41
NEDD1-209ENST00000557092 MED13Q9UHV7 2174 aa17.59■□□□□ 0.41
NEDD1-209ENST00000557092 CCDC88CQ9P219 2028 aa17.59■□□□□ 0.41
NEDD1-209ENST00000557092 CEACAM4O75871 244 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 IGHEP01854 428 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 ALBP02768 609 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 C8GP07360 202 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 MRPS25P82663 173 aaKnown RBP17.58■□□□□ 0.4
NEDD1-209ENST00000557092 PDIA2Q13087 525 aaKnown RBP17.58■□□□□ 0.4
NEDD1-209ENST00000557092 SP140Q13342 867 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 MUM1Q2TAK8 710 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 STEAP4Q687X5 459 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 ZNF425Q6IV72 752 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 PPP1R32Q7Z5V6 425 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 GALNT7Q86SF2 657 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 CSNK1A1LQ8N752 337 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 CLEC1AQ8NC01 280 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 RERGQ96A58 199 aaPredicted RBP17.58■□□□□ 0.4
NEDD1-209ENST00000557092 COL26A1Q96A83 441 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 NUDT9Q9BW91 350 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 SOX17Q9H6I2 414 aaPredicted RBP17.58■□□□□ 0.4
NEDD1-209ENST00000557092 WDR54Q9H977 334 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 MLXIPLQ9NP71 852 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 CUEDC1Q9NWM3 386 aaPredicted RBP17.58■□□□□ 0.4
NEDD1-209ENST00000557092 P4HTMQ9NXG6 502 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 GPR83Q9NYM4 423 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 CTSFQ9UBX1 484 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 CDC23Q9UJX2 597 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 SNX24Q9Y343 169 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.58■□□□□ 0.4
NEDD1-209ENST00000557092 PCM1Q15154 2024 aa17.58■□□□□ 0.4
NEDD1-209ENST00000557092 PABPN1LA6NDY0 278 aaKnown RBP17.57■□□□□ 0.4
NEDD1-209ENST00000557092 NDC80O14777 642 aa17.57■□□□□ 0.4
NEDD1-209ENST00000557092 MED26O95402 600 aa17.57■□□□□ 0.4
NEDD1-209ENST00000557092 ONECUT2O95948 504 aa17.57■□□□□ 0.4
NEDD1-209ENST00000557092 EZRP15311 586 aaKnown RBP17.57■□□□□ 0.4
NEDD1-209ENST00000557092 RPL21P46778 160 aaKnown RBP17.57■□□□□ 0.4
NEDD1-209ENST00000557092 TBPL1P62380 186 aa17.57■□□□□ 0.4
NEDD1-209ENST00000557092 NKG7Q16617 165 aa17.57■□□□□ 0.4
NEDD1-209ENST00000557092 DCAF10Q5QP82 559 aa17.57■□□□□ 0.4
NEDD1-209ENST00000557092 HECTD2Q5U5R9 776 aa17.57■□□□□ 0.4
NEDD1-209ENST00000557092 PRMT9Q6P2P2 845 aa17.57■□□□□ 0.4
NEDD1-209ENST00000557092 MBOAT1Q6ZNC8 495 aa17.57■□□□□ 0.4
NEDD1-209ENST00000557092 SHISA6Q6ZSJ9 500 aa17.57■□□□□ 0.4
NEDD1-209ENST00000557092 LRRC56Q8IYG6 542 aaPredicted RBP17.57■□□□□ 0.4
NEDD1-209ENST00000557092 C17orf53Q8N3J3 647 aaPredicted RBP17.57■□□□□ 0.4
NEDD1-209ENST00000557092 FBXO36Q8NEA4 188 aa17.57■□□□□ 0.4
NEDD1-209ENST00000557092 ALKBH8Q96BT7 664 aaKnown RBP17.57■□□□□ 0.4
NEDD1-209ENST00000557092 C10orf90Q96M02 699 aa17.57■□□□□ 0.4
NEDD1-209ENST00000557092 CCDC138Q96M89 665 aa17.57■□□□□ 0.4
NEDD1-209ENST00000557092 SPSB2Q99619 263 aa17.57■□□□□ 0.4
NEDD1-209ENST00000557092 SLC26A1Q9H2B4 701 aa17.57■□□□□ 0.4
NEDD1-209ENST00000557092 PARVBQ9HBI1 364 aa17.57■□□□□ 0.4
NEDD1-209ENST00000557092 ZNF304Q9HCX3 659 aa17.57■□□□□ 0.4
NEDD1-209ENST00000557092 ZFATQ9P243 1243 aa17.57■□□□□ 0.4
NEDD1-209ENST00000557092 NXT1Q9UKK6 140 aaKnown RBP17.57■□□□□ 0.4
NEDD1-209ENST00000557092 CORO1CQ9ULV4 474 aaPredicted RBP17.57■□□□□ 0.4
NEDD1-209ENST00000557092 PDE10AQ9Y233 779 aa17.57■□□□□ 0.4
NEDD1-209ENST00000557092 PCDHGB7Q9Y5F8 929 aa17.57■□□□□ 0.4
NEDD1-209ENST00000557092 HAT1O14929 419 aa17.56■□□□□ 0.4
NEDD1-209ENST00000557092 SLC16A5O15375 505 aa17.56■□□□□ 0.4
NEDD1-209ENST00000557092 HIST1H2AGP0C0S8 130 aaPredicted RBP17.56■□□□□ 0.4
NEDD1-209ENST00000557092 HIST1H2ADP20671 130 aa17.56■□□□□ 0.4
NEDD1-209ENST00000557092 FBLP22087 321 aaKnown RBP17.56■□□□□ 0.4
NEDD1-209ENST00000557092 CASQ1P31415 396 aa17.56■□□□□ 0.4
NEDD1-209ENST00000557092 IL2P60568 153 aa17.56■□□□□ 0.4
NEDD1-209ENST00000557092 MGAT5Q09328 741 aa17.56■□□□□ 0.4
NEDD1-209ENST00000557092 FASTKD3Q14CZ7 662 aaKnown RBP17.56■□□□□ 0.4
NEDD1-209ENST00000557092 IGFBP7Q16270 282 aa17.56■□□□□ 0.4
NEDD1-209ENST00000557092 HKDC1Q2TB90 917 aa17.56■□□□□ 0.4
NEDD1-209ENST00000557092 PRTGQ2VWP7 1150 aa17.56■□□□□ 0.4
NEDD1-209ENST00000557092 PRAMEF13Q5VWM6 474 aa17.56■□□□□ 0.4
NEDD1-209ENST00000557092 FAM45BPQ6NSW5 357 aa17.56■□□□□ 0.4
NEDD1-209ENST00000557092 PLD3Q8IV08 490 aa17.56■□□□□ 0.4
NEDD1-209ENST00000557092 BBOF1Q8ND07 529 aa17.56■□□□□ 0.4
NEDD1-209ENST00000557092 FAM45AQ8TCE6 357 aa17.56■□□□□ 0.4
NEDD1-209ENST00000557092 HIST1H2AHQ96KK5 128 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms