RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 IL17FQ96PD4 163 aa7.04□□□□□ -1.28
SCFD1-222ENST00000556768 SELENOSQ9BQE4 189 aa7.04□□□□□ -1.28
SCFD1-222ENST00000556768 FAM167BQ9BTA0 163 aa7.04□□□□□ -1.28
SCFD1-222ENST00000556768 SPATA7Q9P0W8 599 aa7.04□□□□□ -1.28
SCFD1-222ENST00000556768 TP53TG5Q9Y2B4 290 aa7.04□□□□□ -1.28
SCFD1-222ENST00000556768 PTRH2Q9Y3E5 179 aaKnown RBP7.04□□□□□ -1.28
SCFD1-222ENST00000556768 PCDHGA9Q9Y5G4 932 aaKnown RBP7.04□□□□□ -1.28
SCFD1-222ENST00000556768 FAM169AQ9Y6X4 670 aa7.04□□□□□ -1.28
SCFD1-222ENST00000556768 SETXQ7Z333 2677 aaKnown RBP7.03□□□□□ -1.28
SCFD1-222ENST00000556768 A0A1B0GX78 115 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 CCNDBP1O95273 360 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 MATN4O95460 622 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 SYF2O95926 243 aaKnown RBP7.03□□□□□ -1.28
SCFD1-222ENST00000556768 TPBGLP0DKB5 382 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 CBSLP0DN79 551 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 PGAM1P18669 254 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 OTX2P32243 289 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 CBSP35520 551 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 RGS4P49798 205 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 RPS26P62854 115 aaKnown RBP7.03□□□□□ -1.28
SCFD1-222ENST00000556768 IL10RAQ13651 578 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 ZIC1Q15915 447 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 CYP2A13Q16696 494 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 HSP90AA5PQ58FG0 334 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 CTSL3PQ5NE16 218 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 THEMIS2Q5TEJ8 643 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 IRAK1BP1Q5VVH5 260 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 CENPUQ71F23 418 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 HPS6Q86YV9 775 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 NAT8LQ8N9F0 302 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 MCOLN3Q8TDD5 553 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 INPP5DQ92835 1189 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 RERGQ96A58 199 aaPredicted RBP7.03□□□□□ -1.28
SCFD1-222ENST00000556768 RUFY1Q96T51 708 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 MIPEPQ99797 713 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 EBNA1BP2Q99848 306 aaKnown RBP7.03□□□□□ -1.28
SCFD1-222ENST00000556768 TRIM4Q9C037 500 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 TAS2R13Q9NYV9 303 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 DHCR7Q9UBM7 475 aaKnown RBP7.03□□□□□ -1.28
SCFD1-222ENST00000556768 RNF14Q9UBS8 474 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 NXT1Q9UKK6 140 aaKnown RBP7.03□□□□□ -1.28
SCFD1-222ENST00000556768 KLHL20Q9Y2M5 609 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 ZNF451Q9Y4E5 1061 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 NFS1Q9Y697 457 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 SAR1BQ9Y6B6 198 aa7.03□□□□□ -1.28
SCFD1-222ENST00000556768 ZCWPW2A0A1B0GU75 182 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 ESYT3A0FGR9 886 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 A6NL46 340 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 TTLL8A6PVC2 850 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 TXNDC9O14530 226 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 ZNF185O15231 689 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 PSIP1O75475 530 aaKnown RBP7.02□□□□□ -1.29
SCFD1-222ENST00000556768 ALBP02768 609 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 EIF2S1P05198 315 aaKnown RBP7.02□□□□□ -1.29
SCFD1-222ENST00000556768 HIST1H2AGP0C0S8 130 aaPredicted RBP7.02□□□□□ -1.29
SCFD1-222ENST00000556768 HIST1H2ADP20671 130 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 GIPRP48546 466 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 DR1Q01658 176 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 OCA2Q04671 838 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 ACSBG2Q5FVE4 666 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 WASHC2DQ5SRD0 308 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 KCNMB4Q86W47 210 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 DENND6AQ8IWF6 608 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 TRIM42Q8IWZ5 723 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 FAM20CQ8IXL6 584 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 OR2L3Q8NG85 312 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 OR2Y1Q8NGV0 311 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 FLVCR1-AS1Q8TAF5 88 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 TM9SF4Q92544 642 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 HIST1H2AHQ96KK5 128 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 CAPZA3Q96KX2 299 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 GBP5Q96PP8 586 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 HIST1H2AJQ99878 128 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 H2AFJQ9BTM1 129 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 MENTQ9BUN1 341 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 ACAT2Q9BWD1 397 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 DDX47Q9H0S4 455 aaKnown RBP7.02□□□□□ -1.29
SCFD1-222ENST00000556768 MRPS30Q9NP92 439 aaKnown RBP7.02□□□□□ -1.29
SCFD1-222ENST00000556768 FBXO6Q9NRD1 293 aaPredicted RBP7.02□□□□□ -1.29
SCFD1-222ENST00000556768 CUTCQ9NTM9 273 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 GPR83Q9NYM4 423 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 ZC3H7BQ9UGR2 993 aaKnown RBP7.02□□□□□ -1.29
SCFD1-222ENST00000556768 PCYOX1Q9UHG3 505 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 TRMT6Q9UJA5 497 aaKnown RBP7.02□□□□□ -1.29
SCFD1-222ENST00000556768 FBXO5Q9UKT4 447 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 CDC14AQ9UNH5 594 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 RUVBL2Q9Y230 463 aaKnown RBP7.02□□□□□ -1.29
SCFD1-222ENST00000556768 DHRS7Q9Y394 339 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 NEU2Q9Y3R4 380 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 RELNP78509 3460 aa7.02□□□□□ -1.29
SCFD1-222ENST00000556768 ZFC3H1O60293 1989 aaKnown RBP7.02□□□□□ -1.29
SCFD1-222ENST00000556768 EIF3FO00303 357 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-222ENST00000556768 DNALI1O14645 258 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-222ENST00000556768 PRPF4O43172 522 aaKnown RBP eCLIP7.01□□□□□ -1.29
SCFD1-222ENST00000556768 DPM1O60762 260 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 KLF7O75840 302 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-222ENST00000556768 DNAJB5O75953 348 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 IPO13O94829 963 aaKnown RBP7.01□□□□□ -1.29
SCFD1-222ENST00000556768 HAUS5O94927 633 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 CAPN1P07384 714 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms