RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 YIPF2Q9BWQ6 316 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 TGIF2Q9GZN2 237 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 ZNF700Q9H0M5 742 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 STOX2Q9P2F5 926 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-221ENST00000556571 RIMKLBQ9ULI2 386 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 PCDHA13Q9Y5I0 950 aa11.3□□□□□ -0.6
ACTN1-221ENST00000556571 SOWAHDA6NJG2 315 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 IQCF5A8MTL0 148 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 CLDN14O95500 239 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 MLYCDO95822 493 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 GAS8O95995 478 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 CELA2AP08217 269 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 ITGAMP11215 1152 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 SLC26A3P40879 764 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 NAP1L1P55209 391 aaKnown RBP11.29□□□□□ -0.6
ACTN1-221ENST00000556571 RWDD2BP57060 319 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 SRSF11Q05519 484 aaKnown RBP11.29□□□□□ -0.6
ACTN1-221ENST00000556571 PCOLCEQ15113 449 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 C3AR1Q16581 482 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 FASTKD1Q53R41 847 aaKnown RBP11.29□□□□□ -0.6
ACTN1-221ENST00000556571 KRTCAP3Q53RY4 240 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 FAAH2Q6GMR7 532 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 FBXO42Q6P3S6 717 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 DNAAF3Q8N9W5 541 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 FAM71DQ8N9W8 422 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 OR2A1Q8NGT9 310 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 OR6P1Q8NGX9 317 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 LKAAEAR1Q8TD35 194 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 ADAMTS18Q8TE60 1221 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 THAP3Q8WTV1 239 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-221ENST00000556571 C14orf79Q96F83 325 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 MAGED4Q96JG8 741 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 SPOCK3Q9BQ16 436 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 TUBB6Q9BUF5 446 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 MKKSQ9NPJ1 570 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-221ENST00000556571 TTC7AQ9ULT0 858 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-221ENST00000556571 PCDHGB6Q9Y5F9 930 aa11.29□□□□□ -0.6
ACTN1-221ENST00000556571 EPN1Q9Y6I3 576 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-221ENST00000556571 OR2A25A4D2G3 310 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 RCCD1A6NED2 376 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 H0YGG7 62 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 C19orf84I3L1E1 186 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 PRMT5O14744 637 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-221ENST00000556571 KPNA5O15131 536 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 PHF2O75151 1096 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 VPS26AO75436 327 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 C1orf105O95561 183 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 ANXA5P08758 320 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 PSMB5P28074 263 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 CMPK1P30085 196 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 CCNFP41002 786 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 KIR3DL1P43629 444 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 ARF3P61204 181 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-221ENST00000556571 ZNF33BQ06732 778 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 CDH17Q12864 832 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 ZNF766Q5HY98 468 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 AARS2Q5JTZ9 985 aaKnown RBP11.28□□□□□ -0.6
ACTN1-221ENST00000556571 TSTD2Q5T7W7 516 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 GARNL3Q5VVW2 1013 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 TMEM205Q6UW68 189 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 NEK10Q6ZWH5 1172 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 ZNF534Q76KX8 674 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 KIAA1328Q86T90 577 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 CDH24Q86UP0 819 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 SPPL2CQ8IUH8 684 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 CEP97Q8IW35 865 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 KRT222Q8N1A0 295 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 OR52K1Q8NGK4 314 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 MAGEC3Q8TD91 643 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 CHTF18Q8WVB6 975 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 SKA2Q8WVK7 121 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-221ENST00000556571 MMABQ96EY8 250 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-221ENST00000556571 CALR3Q96L12 384 aaKnown RBP11.28□□□□□ -0.6
ACTN1-221ENST00000556571 IMMP1LQ96LU5 166 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 FOPNLQ96NB1 174 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 PANX3Q96QZ0 392 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 DPH7Q9BTV6 452 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 GPAMQ9HCL2 828 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 SLC2A6Q9UGQ3 507 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 TINAGQ9UJW2 476 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 ANAPC5Q9UJX4 755 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 ZNF835Q9Y2P0 537 aa11.28□□□□□ -0.6
ACTN1-221ENST00000556571 A0A1W2PPV9 198 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 GOLGA6L9A6NEM1 432 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 ERI2A8K979 691 aaKnown RBP11.27□□□□□ -0.61
ACTN1-221ENST00000556571 FFAR3O14843 346 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 GPR42O15529 346 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 TTI1O43156 1089 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 NRP2O60462 931 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 WISP2O76076 250 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 PTMAP06454 111 aaKnown RBP11.27□□□□□ -0.61
ACTN1-221ENST00000556571 ADRA1DP25100 572 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 KRTAP10-9P60411 292 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 PRAMEP78395 509 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 PMP22Q01453 160 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 ACVR1Q04771 509 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 CCSMST1Q4G0I0 132 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 PTRHD1Q6GMV3 140 aaKnown RBP11.27□□□□□ -0.61
ACTN1-221ENST00000556571 LRRC8BQ6P9F7 803 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 Q6ZPB1 254 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms