RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 hCG_2014768A0A024R1R8 64 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 TCRBV3S1A0A5B6 114 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 MYBPHLA2RUH7 354 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 TMEM221A6NGB7 291 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 C16orf96A6NNT2 1141 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 ZAR1LA6NP61 321 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 H3BNH8 94 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 ZNF701M0R085 212 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 M0R296 226 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 PTGESO14684 152 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 ACOT8O14734 319 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 INPP4BO15327 924 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 HTRA2O43464 458 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 TBC1D4O60343 1298 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 KERAO60938 352 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 VPS26AO75436 327 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 TIPRLO75663 272 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 RNASEH2AO75792 299 aaKnown RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 RPP40O75818 363 aaKnown RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 SOAT2O75908 522 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 B3GAT3O94766 335 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 RHOBTB1O94844 696 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 OR6B1O95007 311 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 SCAF4O95104 1147 aaKnown RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 APOL3O95236 402 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 BMP10O95393 424 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 ESRRBO95718 433 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 SNAI1O95863 264 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 LDLRP01130 860 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 IGLV3-25P01717 112 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 FGBP02675 491 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 TFAP2AP05549 437 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 FYNP06241 537 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 HNRNPCP07910 306 aaKnown RBP eCLIP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 SPATA31D3P0C874 917 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 CDH2P19022 906 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 IMPDH1P20839 514 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 BDNFP23560 247 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 CAPGP40121 348 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 NBL1P41271 181 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 CASP2P42575 452 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 LEPRP48357 1165 aaKnown RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 ARCN1P48444 511 aaKnown RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 LSSP48449 732 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 SLC5A3P53794 718 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 ADARP55265 1226 aaKnown RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 TBX4P57082 545 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 CDKL1Q00532 357 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 LCP2Q13094 533 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 FSCN1Q16658 493 aaKnown RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 MYLK3Q32MK0 819 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 PARP15Q460N3 678 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 AARS2Q5JTZ9 985 aaKnown RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 RBM20Q5T481 1227 aaKnown RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 LCN8Q6JVE9 175 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 UGT3A1Q6NUS8 523 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 SYCE2Q6PIF2 218 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 CNSTQ6PJW8 725 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 ISLR2Q6UXK2 745 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 SPATA31D4Q6ZUB0 917 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 PAQR9Q6ZVX9 377 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 KDELC2Q7Z4H8 507 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 GDF7Q7Z4P5 450 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 PTAR1Q7Z6K3 402 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 PATL1Q86TB9 770 aaKnown RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 LRRTM3Q86VH5 581 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 CARM1Q86X55 608 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 TICAM1Q8IUC6 712 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 CLVS1Q8IUQ0 354 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 CEP97Q8IW35 865 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 ARHGAP12Q8IWW6 846 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 ADHFE1Q8IWW8 467 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 LSMEM2Q8N112 164 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 MYO1HQ8N1T3 1032 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 NKAPQ8N5F7 415 aaKnown RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 AADATQ8N5Z0 425 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 PAF1Q8N7H5 531 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 FAM47BQ8NA70 645 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 LEMD2Q8NC56 503 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 FAM156AQ8NDB6 213 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 ACVR1CQ8NER5 493 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 ZNF420Q8TAQ5 688 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 STAG3L4Q8TBR4 150 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 PNPT1Q8TCS8 783 aaKnown RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 SPPL2BQ8TCT7 592 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 BLOC1S5Q8TDH9 187 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 TSPEARQ8WU66 669 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 NELL1Q92832 810 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 FATE1Q969F0 183 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 POP5Q969H6 163 aaKnown RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 ABTB1Q969K4 478 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 RMDN1Q96DB5 314 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 VPS50Q96JG6 964 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 SLC45A3Q96JT2 553 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 PGLYRP2Q96PD5 576 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 GAD1Q99259 594 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 MTG1Q9BT17 334 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 ADI1Q9BV57 179 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 MLST8Q9BVC4 326 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 SLC2A11Q9BYW1 496 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms