RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 AOAHP28039 575 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 HTR1BP28222 390 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 DNAJA1P31689 397 aaKnown RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 CCR7P32248 378 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 CA5AP35218 305 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 GZMMP51124 257 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 NEK2P51955 445 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 PHC1P78364 1004 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 GSTM4Q03013 218 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 ZNF33BQ06732 778 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 LMAN2Q12907 356 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 CSTF3Q12996 717 aaKnown RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 CDK5R2Q13319 367 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 RAPSNQ13702 412 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 TRIM16LQ309B1 348 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 PTCHD3Q3KNS1 767 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 PLEKHG6Q3KR16 790 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 ATP13A5Q4VNC0 1218 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 PLEKHS1Q5SXH7 462 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 OR4F3Q6IEY1 312 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 CAPN13Q6MZZ7 669 aaPredicted RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 NOXRED1Q6NXP6 359 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 NEK5Q6P3R8 708 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 CYP2U1Q7Z449 544 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 TMEM179BQ7Z7N9 219 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 FAM217AQ8IXS0 508 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 CENPSQ8N2Z9 138 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 PARP8Q8N3A8 854 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 L3MBTL4Q8NA19 623 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 ABHD11Q8NFV4 315 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 CNIH3Q8TBE1 160 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 ASB11Q8WXH4 323 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 SGCDQ92629 289 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 MRPS31Q92665 395 aaKnown RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 TANKQ92844 425 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 FBXL8Q96CD0 374 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 TMEM169Q96HH4 297 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 SLC22A12Q96S37 553 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 ZNF347Q96SE7 839 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 VN1R3Q9BXE9 311 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 REEP1Q9H902 201 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 LTB4R2Q9NPC1 389 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 IL1RAPQ9NPH3 570 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 AASDHPPTQ9NRN7 309 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 THG1LQ9NWX6 298 aaKnown RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 FAM120CQ9NX05 1096 aaKnown RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 MAPRE3Q9UPY8 281 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 CORO2BQ9UQ03 480 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 ERGIC3Q9Y282 383 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 PCDHGB1Q9Y5G3 927 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 GMPPBQ9Y5P6 360 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 INSL5Q9Y5Q6 135 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 DGKBQ9Y6T7 804 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 OBSL1O75147 1896 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 IGLV3-16A0A075B6K0 115 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 KCNE1BA0A087WTH5 132 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 CXorf51AA0A1B0GTR3 108 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 SERTM1A2A2V5 107 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 MAGEB17A8MXT2 336 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 NPIPB8E9PQR5 432 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 J3QL48 77 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 CLIC1O00299 241 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 GFRA2O00451 464 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 AXIN1O15169 862 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 RGS10O43665 173 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 UGDHO60701 494 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 MRPS14O60783 128 aaKnown RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 XYLBO75191 536 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 INMTO95050 263 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 FKBP9O95302 570 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 EFEMP2O95967 443 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 CYP4B1P13584 511 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 COX7A2P14406 83 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 JUPP14923 745 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 HOXB9P17482 250 aaPredicted RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 AMD1P17707 334 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 ENGP17813 658 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 EPORP19235 508 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 FPR1P21462 350 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 PPIBP23284 216 aaKnown RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 ITPKAP23677 461 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 TACR1P25103 407 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 PTPN6P29350 595 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 CDKN2CP42773 168 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 SLC6A12P48065 614 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 RXRGP48443 463 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 CD97P48960 835 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 ST13P50502 369 aaKnown RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 CXCR4P61073 352 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 POLR2LP62875 67 aaKnown RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 IRF8Q02556 426 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 MVKQ03426 396 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 PIGFQ07326 219 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 CHIT1Q13231 466 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 ITGADQ13349 1161 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 KCNC3Q14003 757 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 SIM2Q14190 667 aaPredicted RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 GPNMBQ14956 572 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 SPCS2Q15005 226 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms