RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 SP140Q13342 867 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 NAE1Q13564 534 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 UGT8Q16880 541 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 ZC3H12BQ5HYM0 836 aaKnown RBP13.08□□□□□ -0.32
SNX6-203ENST00000555416 AGTRAPQ6RW13 159 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 SBSNQ6UWP8 590 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 TTLL10Q6ZVT0 673 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 COX15Q7KZN9 410 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 SPATA6LQ8N4H0 392 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 METTL27Q8N6F8 245 aaPredicted RBP13.08□□□□□ -0.32
SNX6-203ENST00000555416 ADAMTS17Q8TE56 1095 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 FBF1Q8TES7 1133 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 PDLIM5Q96HC4 596 aaKnown RBP13.08□□□□□ -0.32
SNX6-203ENST00000555416 CCDC138Q96M89 665 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 CATSPER2Q96P56 530 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 ARHGAP9Q9BRR9 750 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 NDC1Q9BTX1 674 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 TRIM55Q9BYV6 548 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 PHACTR1Q9C0D0 580 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 CUTCQ9NTM9 273 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 TCFL5Q9UL49 500 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 COL6A6A6NMZ7 2263 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 FITM1A5D6W6 292 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 NPEPPSL1A6NEC2 478 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 EIF4E1BA6NMX2 242 aaKnown RBP13.07□□□□□ -0.32
SNX6-203ENST00000555416 H7BY64 318 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 K7EM74 188 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 PHGDHO43175 533 aaKnown RBP13.07□□□□□ -0.32
SNX6-203ENST00000555416 DNAJB5O75953 348 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 EIF2S1P05198 315 aaKnown RBP13.07□□□□□ -0.32
SNX6-203ENST00000555416 HBQ1P09105 142 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 ALAS2P22557 587 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 DCDP81605 110 aaKnown RBP13.07□□□□□ -0.32
SNX6-203ENST00000555416 CHAF1BQ13112 559 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 PPP1R3AQ16821 1122 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 PRTGQ2VWP7 1150 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 KBTBD12Q3ZCT8 623 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 NKAIN1Q4KMZ8 207 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 THEMIS2Q5TEJ8 643 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 MLIPQ5VWP3 458 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 CPZQ66K79 652 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 LRRC8EQ6NSJ5 796 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 CYS1Q717R9 158 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 SYVN1Q86TM6 617 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 APOBEC4Q8WW27 367 aaKnown RBP13.07□□□□□ -0.32
SNX6-203ENST00000555416 ALKBH8Q96BT7 664 aaKnown RBP13.07□□□□□ -0.32
SNX6-203ENST00000555416 PYCR2Q96C36 320 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 C10orf90Q96M02 699 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 PRAP1Q96NZ9 151 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 OR2A5Q96R48 311 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 OR4K3Q96R72 315 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 ZFYVE21Q9BQ24 234 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 SGPP1Q9BX95 441 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 GEMIN8Q9NWZ8 242 aaKnown RBP13.07□□□□□ -0.32
SNX6-203ENST00000555416 UTP6Q9NYH9 597 aaKnown RBP13.07□□□□□ -0.32
SNX6-203ENST00000555416 SRPK3Q9UPE1 567 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 MDC1Q14676 2089 aaKnown RBP13.07□□□□□ -0.32
SNX6-203ENST00000555416 ZNF462Q96JM2 2506 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 MED13Q9UHV7 2174 aa13.07□□□□□ -0.32
SNX6-203ENST00000555416 FASNP49327 2511 aaKnown RBP13.06□□□□□ -0.32
SNX6-203ENST00000555416 A0A1B0GX78 115 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 ZNF839A8K0R7 811 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 P2RX6O15547 441 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 SRPX2O60687 465 aaPredicted RBP13.06□□□□□ -0.32
SNX6-203ENST00000555416 GUCA1CO95843 209 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 RECKO95980 971 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 GSTA2P09210 222 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 NR1D1P20393 614 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 AGXTP21549 392 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 ECHS1P30084 290 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 CCR10P46092 362 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 OR1D4P47884 311 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 KCNAB2Q13303 367 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 GRM7Q14831 915 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 HKDC1Q2TB90 917 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 C18orf21Q32NC0 220 aaPredicted RBP13.06□□□□□ -0.32
SNX6-203ENST00000555416 TCTE1Q5JU00 501 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 PRAMEF13Q5VWM6 474 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 MRPL14Q6P1L8 145 aaKnown RBP13.06□□□□□ -0.32
SNX6-203ENST00000555416 SHISA5Q8N114 240 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 ARHGEF39Q8N4T4 335 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 PPM1NQ8N819 430 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 LRRN4CLQ8ND94 238 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 PROKR1Q8TCW9 393 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 GPR22Q99680 433 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 RBBP8Q99708 897 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 CPNE1Q99829 537 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 DPH2Q9BQC3 489 aaPredicted RBP13.06□□□□□ -0.32
SNX6-203ENST00000555416 CCDC177Q9NQR7 707 aaPredicted RBP13.06□□□□□ -0.32
SNX6-203ENST00000555416 TXLNGQ9NUQ3 528 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 ARL15Q9NXU5 204 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 NSMCE4AQ9NXX6 385 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 IFT80Q9P2H3 777 aaPredicted RBP13.06□□□□□ -0.32
SNX6-203ENST00000555416 NDOR1Q9UHB4 597 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 SNX7Q9UNH6 387 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 POLHQ9Y253 713 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 RUVBL1Q9Y265 456 aaKnown RBP13.06□□□□□ -0.32
SNX6-203ENST00000555416 MRPS2Q9Y399 296 aaKnown RBP13.06□□□□□ -0.32
SNX6-203ENST00000555416 MAU2Q9Y6X3 613 aa13.06□□□□□ -0.32
SNX6-203ENST00000555416 BSNQ9UPA5 3926 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms