RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 CDKN2BP42772 138 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 MAGEA1P43355 309 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 ZNF75DP51815 510 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 STC1P52823 247 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 THOP1P52888 689 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 SRP54P61011 504 aaKnown RBP4.09□□□□□ -1.75
CPSF2-204ENST00000555244 IL9RQ01113 521 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 PPARDQ03181 441 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 GBE1Q04446 702 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 NIPAL4Q0D2K0 466 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 TRAF2Q12933 501 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 DNAJC3Q13217 504 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 XRCC4Q13426 336 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 TP53BP2Q13625 1128 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 TFDP2Q14188 446 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 KRT81Q14533 505 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 ZNF235Q14590 738 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 NR1D2Q14995 579 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 PDK1Q15118 436 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 IRF4Q15306 451 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 ELOCQ15369 112 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 CNGA3Q16281 694 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 PDCD2Q16342 344 aaPredicted RBP4.09□□□□□ -1.75
CPSF2-204ENST00000555244 CLPPQ16740 277 aaPredicted RBP4.09□□□□□ -1.75
CPSF2-204ENST00000555244 ALG11Q2TAA5 492 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 TEX44Q53QW1 395 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 ARMC12Q5T9G4 340 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 TEDDM1Q5T9Z0 273 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 PLAG1Q6DJT9 500 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 C11orf63Q6NUN7 778 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 CRTC1Q6UUV9 634 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 DHRS13Q6UX07 377 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 PTAR1Q7Z6K3 402 aaPredicted RBP4.09□□□□□ -1.75
CPSF2-204ENST00000555244 ZNF354CQ86Y25 554 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 TMTC1Q8IUR5 882 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 CCDC13Q8IYE1 715 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 KATNAL2Q8IYT4 538 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 NDUFAF2Q8N183 169 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 PELI3Q8N2H9 469 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.09□□□□□ -1.75
CPSF2-204ENST00000555244 ZNF527Q8NB42 609 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 OR56A4Q8NGH8 313 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 NAT6Q93015 286 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 ZNF503Q96F45 646 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 DTD2Q96FN9 168 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 IMP4Q96G21 291 aaKnown RBP4.09□□□□□ -1.75
CPSF2-204ENST00000555244 COX14Q96I36 57 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 TRIB3Q96RU7 358 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 WDR24Q96S15 920 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 SEMA3CQ99985 751 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 C19orf43Q9BQ61 176 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 CRB3Q9BUF7 120 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 LRRC61Q9BV99 259 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 TDRD1Q9BXT4 1180 aaKnown RBP4.09□□□□□ -1.75
CPSF2-204ENST00000555244 CALN1Q9BXU9 219 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 ACTRT3Q9BYD9 372 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 FRMD8Q9BZ67 464 aaPredicted RBP4.09□□□□□ -1.75
CPSF2-204ENST00000555244 AMBRA1Q9C0C7 1298 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 SLC25A51Q9H1U9 297 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 MAGEE1Q9HCI5 957 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 CASS4Q9NQ75 786 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 RBM22Q9NW64 420 aaKnown RBP eCLIP4.09□□□□□ -1.75
CPSF2-204ENST00000555244 TRNAU1APQ9NX07 287 aaKnown RBP4.09□□□□□ -1.75
CPSF2-204ENST00000555244 APOBEC3BQ9UH17 382 aaKnown RBP4.09□□□□□ -1.75
CPSF2-204ENST00000555244 SERTAD3Q9UJW9 196 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 APPL1Q9UKG1 709 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 SLC17A4Q9Y2C5 497 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 RAI2Q9Y5P3 530 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 EPN1Q9Y6I3 576 aaPredicted RBP4.09□□□□□ -1.75
CPSF2-204ENST00000555244 ATMQ13315 3056 aa4.09□□□□□ -1.75
CPSF2-204ENST00000555244 COL27A1Q8IZC6 1860 aaPredicted RBP4.09□□□□□ -1.76
CPSF2-204ENST00000555244 HELZ2Q9BYK8 2649 aaKnown RBP4.08□□□□□ -1.76
CPSF2-204ENST00000555244 CENPVL1A0A0U1RR11 272 aa4.08□□□□□ -1.76
CPSF2-204ENST00000555244 LOC285095A0A1B0GVY8 99 aa4.08□□□□□ -1.76
CPSF2-204ENST00000555244 TMEM202A6NGA9 273 aa4.08□□□□□ -1.76
CPSF2-204ENST00000555244 NPIPB15A6NHN6 443 aaPredicted RBP4.08□□□□□ -1.76
CPSF2-204ENST00000555244 ANKRD36A6QL64 1941 aa4.08□□□□□ -1.76
CPSF2-204ENST00000555244 HACD1B0YJ81 288 aa4.08□□□□□ -1.76
CPSF2-204ENST00000555244 ANKRD66B4E2M5 251 aa4.08□□□□□ -1.76
CPSF2-204ENST00000555244 GPR89AB7ZAQ6 455 aa4.08□□□□□ -1.76
CPSF2-204ENST00000555244 CACNB4O00305 520 aaPredicted RBP4.08□□□□□ -1.76
CPSF2-204ENST00000555244 NUDT21O43809 227 aaKnown RBP4.08□□□□□ -1.76
CPSF2-204ENST00000555244 RRP9O43818 475 aaKnown RBP4.08□□□□□ -1.76
CPSF2-204ENST00000555244 TDRD6O60522 2096 aaKnown RBP4.08□□□□□ -1.76
CPSF2-204ENST00000555244 SDC3O75056 442 aa4.08□□□□□ -1.76
CPSF2-204ENST00000555244 COQ9O75208 318 aa4.08□□□□□ -1.76
CPSF2-204ENST00000555244 SKAP2O75563 359 aaPredicted RBP4.08□□□□□ -1.76
CPSF2-204ENST00000555244 ZNF189O75820 626 aaPredicted RBP4.08□□□□□ -1.76
CPSF2-204ENST00000555244 NEBLO76041 1014 aa4.08□□□□□ -1.76
CPSF2-204ENST00000555244 MT-CO3P00414 261 aa4.08□□□□□ -1.76
CPSF2-204ENST00000555244 TNFP01375 233 aa4.08□□□□□ -1.76
CPSF2-204ENST00000555244 HLA-DQB2P05538 268 aa4.08□□□□□ -1.76
CPSF2-204ENST00000555244 GPR89BP0CG08 455 aa4.08□□□□□ -1.76
CPSF2-204ENST00000555244 JUPP14923 745 aa4.08□□□□□ -1.76
CPSF2-204ENST00000555244 PPP3CBP16298 524 aa4.08□□□□□ -1.76
CPSF2-204ENST00000555244 MAKP20794 623 aa4.08□□□□□ -1.76
CPSF2-204ENST00000555244 TGM2P21980 687 aa4.08□□□□□ -1.76
CPSF2-204ENST00000555244 CA4P22748 312 aa4.08□□□□□ -1.76
CPSF2-204ENST00000555244 ZFP36P26651 326 aaKnown RBP4.08□□□□□ -1.76
CPSF2-204ENST00000555244 CTNNA1P35221 906 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms