RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 TMEM110-MUSTN1A8MSY1 372 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 HEPACAM2A8MVW5 462 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 M0QZ24 198 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 TLR4O00206 839 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 O00370 1275 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 P2RY10O00398 339 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 ANGPT2O15123 496 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 NDUFB4O95168 129 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 ACSL3O95573 720 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 CXCL14O95715 111 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 AK1P00568 194 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 RAB40ALP0C0E4 278 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 UBA1P22314 1058 aaKnown RBP4.96□□□□□ -1.62
VRK1-203ENST00000555067 ACP1P24666 158 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 CCND2P30279 289 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 SLC6A6P31641 620 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 GBX2P52951 348 aaPredicted RBP4.96□□□□□ -1.62
VRK1-203ENST00000555067 GALK2Q01415 458 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 FOLH1Q04609 750 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 ZNF155Q12901 538 aaPredicted RBP4.96□□□□□ -1.62
VRK1-203ENST00000555067 MELKQ14680 651 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 MAPK11Q15759 364 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 UGP2Q16851 508 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 SYT16Q17RD7 645 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 AMZ1Q400G9 498 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 EPC2Q52LR7 807 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 TEX35Q5T0J7 233 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 NOTUMQ6P988 496 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 CYB5D1Q6P9G0 228 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 CCBE1Q6UXH8 406 aaPredicted RBP4.96□□□□□ -1.62
VRK1-203ENST00000555067 ADAMTSL2Q86TH1 951 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 AMZ2Q86W34 360 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 AQP12AQ8IXF9 295 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 RASGEF1CQ8N431 466 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 SPATA6LQ8N4H0 392 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 OR1J2Q8NGS2 313 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 RNF139Q8WU17 664 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 UBLCP1Q8WVY7 318 aaPredicted RBP4.96□□□□□ -1.62
VRK1-203ENST00000555067 FIG4Q92562 907 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 TANKQ92844 425 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 AP2M1Q96CW1 435 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 ERLEC1Q96DZ1 483 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 C3orf30Q96M34 536 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 NSMCE2Q96MF7 247 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 SPATA33Q96N06 139 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 TEX13AQ9BXU3 409 aaPredicted RBP4.96□□□□□ -1.62
VRK1-203ENST00000555067 MAGIXQ9H6Y5 334 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 VPS37BQ9H9H4 285 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 MYNNQ9NPC7 610 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 MKKSQ9NPJ1 570 aaPredicted RBP4.96□□□□□ -1.62
VRK1-203ENST00000555067 ACSS1Q9NUB1 689 aaPredicted RBP4.96□□□□□ -1.62
VRK1-203ENST00000555067 ATAD3AQ9NVI7 634 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 FAM118AQ9NWS6 357 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 SLCO1C1Q9NYB5 712 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 CISD1Q9NZ45 108 aaKnown RBP4.96□□□□□ -1.62
VRK1-203ENST00000555067 SLC9A2Q9UBY0 812 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 FAM153AQ9UHL3 310 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 ITM2BQ9Y287 266 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 PLEKHA6Q9Y2H5 1048 aa4.96□□□□□ -1.62
VRK1-203ENST00000555067 A0A1W2PPQ1 181 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 CTAGE9A4FU28 777 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 SOCS6O14544 535 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 NDUFS4O43181 175 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 PPIP5K2O43314 1243 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 FGF17O60258 216 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 GLCEO94923 617 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 PRAMEF12O95522 483 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 PAK4O96013 591 aaPredicted RBP4.95□□□□□ -1.62
VRK1-203ENST00000555067 SPP1P10451 314 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 TOP1P11387 765 aaKnown RBP4.95□□□□□ -1.62
VRK1-203ENST00000555067 CD22P20273 847 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 DNAJB1P25685 340 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 CHATP28329 748 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 ASCL1P50553 236 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 CRIP2P52943 208 aaPredicted RBP4.95□□□□□ -1.62
VRK1-203ENST00000555067 CDK3Q00526 305 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 GRIK2Q13002 908 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 RAPSNQ13702 412 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 BOLA3Q53S33 107 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.95□□□□□ -1.62
VRK1-203ENST00000555067 ALS2CLQ60I27 953 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 RAET1GQ6H3X3 334 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 AFTPHQ6ULP2 937 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 ENPP7Q6UWV6 458 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 SYVN1Q86TM6 617 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 AMER3Q8N944 861 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 L3MBTL4Q8NA19 623 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 CTNNBL1Q8WYA6 563 aaPredicted RBP4.95□□□□□ -1.62
VRK1-203ENST00000555067 THRSPQ92748 146 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 TAF15Q92804 592 aaKnown RBP eCLIP4.95□□□□□ -1.62
VRK1-203ENST00000555067 SLAMF9Q96A28 289 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 EPSTI1Q96J88 318 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 PRMT6Q96LA8 375 aaPredicted RBP4.95□□□□□ -1.62
VRK1-203ENST00000555067 DUX3Q96PT4 197 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 SEPHS2Q99611 448 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 GFI1Q99684 422 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 KCNN2Q9H2S1 579 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 RIBC2Q9H4K1 309 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 ESRP2Q9H6T0 727 aaKnown RBP4.95□□□□□ -1.62
VRK1-203ENST00000555067 RPF1Q9H9Y2 349 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms