RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 IFRD1O00458 451 aaPredicted RBP14.39□□□□□ -0.11
XRCC3-211ENST00000555055 XYLBO75191 536 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 LDLRP01130 860 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 EBLN1P0CF75 366 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 GABARAPL2P60520 117 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 KIAA0040Q15053 153 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 TRIM16LQ309B1 348 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 HENMT1Q5T8I9 393 aaKnown RBP14.39□□□□□ -0.11
XRCC3-211ENST00000555055 GLYATQ6IB77 296 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 GALNT18Q6P9A2 607 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 NEK10Q6ZWH5 1172 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 FKBP9P1Q75LS8 142 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 HID1Q8IV36 788 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 RAVER1Q8IY67 606 aaKnown RBP14.39□□□□□ -0.11
XRCC3-211ENST00000555055 GPR65Q8IYL9 337 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 C2orf73Q8N5S3 287 aaPredicted RBP14.39□□□□□ -0.11
XRCC3-211ENST00000555055 SLC13A3Q8WWT9 602 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 BIRC7Q96CA5 298 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 PPP3R2Q96LZ3 170 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 INPP5KQ9BT40 448 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 NTMT1Q9BV86 223 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 SLC12A9Q9BXP2 914 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 CARS2Q9HA77 564 aaKnown RBP14.39□□□□□ -0.11
XRCC3-211ENST00000555055 ANAPC2Q9UJX6 822 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 CLDN25C9JDP6 229 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 E7EQ34 232 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 CISD3P0C7P0 127 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 EEFSECP57772 596 aaKnown RBP14.39□□□□□ -0.11
XRCC3-211ENST00000555055 CHIT1Q13231 466 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 NEDD8Q15843 81 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 PGS1Q32NB8 556 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 ZNF805Q5CZA5 627 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 C9orf50Q5SZB4 431 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 XAF1Q6GPH4 301 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 LIPIQ6XZB0 460 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 MSRB3Q8IXL7 192 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 SNX19Q92543 992 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 TMEM45AQ9NWC5 275 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 TBC1D14Q9P2M4 693 aa14.39□□□□□ -0.11
XRCC3-211ENST00000555055 EIF3LQ9Y262 564 aaKnown RBP14.39□□□□□ -0.11
XRCC3-211ENST00000555055 PGRP06401 933 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 WASP42768 502 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 CDKN2CP42773 168 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 RXRGP48443 463 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 IST1P53990 364 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 PFN3P60673 137 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 LAPTM5Q13571 262 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 MAPKAPK3Q16644 382 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 SYTL3Q4VX76 610 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 FAM78AQ5JUQ0 283 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 TMEM214Q6NUQ4 689 aaKnown RBP14.38□□□□□ -0.11
XRCC3-211ENST00000555055 TMEM220Q6QAJ8 160 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 CCDC80Q76M96 950 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 FBXO30Q8TB52 745 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 SP7Q8TDD2 431 aaPredicted RBP14.38□□□□□ -0.11
XRCC3-211ENST00000555055 S100ZQ8WXG8 99 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 GTF2H4Q92759 462 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 TAMM41Q96BW9 452 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 OR52E6Q96RD3 313 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 BDH2Q9BUT1 245 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 RDH14Q9HBH5 336 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 HMG20AQ9NP66 347 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 PCYT1BQ9Y5K3 369 aaPredicted RBP14.38□□□□□ -0.11
XRCC3-211ENST00000555055 J3QRK9 145 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 SPINT1O43278 529 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 MMP20O60882 483 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 PRSS23O95084 383 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 HPRP00739 348 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 ALBP02768 609 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 CYP2A6P11509 494 aaPredicted RBP14.38□□□□□ -0.11
XRCC3-211ENST00000555055 TMEM115Q12893 351 aaPredicted RBP14.38□□□□□ -0.11
XRCC3-211ENST00000555055 NAE1Q13564 534 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 SKIV2LQ15477 1246 aaKnown RBP14.38□□□□□ -0.11
XRCC3-211ENST00000555055 FNDC3BQ53EP0 1204 aaKnown RBP14.38□□□□□ -0.11
XRCC3-211ENST00000555055 OTUD3Q5T2D3 398 aaPredicted RBP14.38□□□□□ -0.11
XRCC3-211ENST00000555055 GCNT7Q6ZNI0 430 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 GET4Q7L5D6 327 aaPredicted RBP14.38□□□□□ -0.11
XRCC3-211ENST00000555055 GALNT10Q86SR1 603 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 OFCC1Q8IZS5 231 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 HDAC2Q92769 488 aaKnown RBP14.38□□□□□ -0.11
XRCC3-211ENST00000555055 USP7Q93009 1102 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 FBXL8Q96CD0 374 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 VMP1Q96GC9 406 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 ALPK1Q96QP1 1244 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 IGFLR1Q9H665 355 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 FANCEQ9HB96 536 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 C1orf109Q9NX04 203 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 GULP1Q9UBP9 304 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 F5P12259 2224 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 NUMA1Q14980 2115 aa14.38□□□□□ -0.11
XRCC3-211ENST00000555055 KRBA1A5PL33 1030 aa14.37□□□□□ -0.11
XRCC3-211ENST00000555055 PABPN1LA6NDY0 278 aaKnown RBP14.37□□□□□ -0.11
XRCC3-211ENST00000555055 AQP9O43315 295 aa14.37□□□□□ -0.11
XRCC3-211ENST00000555055 NUAK1O60285 661 aa14.37□□□□□ -0.11
XRCC3-211ENST00000555055 SLC16A8O95907 504 aa14.37□□□□□ -0.11
XRCC3-211ENST00000555055 FUT4P22083 530 aa14.37□□□□□ -0.11
XRCC3-211ENST00000555055 POLR2IP36954 125 aaKnown RBP14.37□□□□□ -0.11
XRCC3-211ENST00000555055 NRIP1P48552 1158 aa14.37□□□□□ -0.11
XRCC3-211ENST00000555055 CYP2A13Q16696 494 aa14.37□□□□□ -0.11
XRCC3-211ENST00000555055 ZNF284Q2VY69 593 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms