RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 FOXA1P55317 472 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 TXNL4AP83876 142 aaKnown RBP16.86■□□□□ 0.29
SHOX-204ENST00000554971 GRB7Q14451 532 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 ZRANB3Q5FWF4 1079 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 LYPLAL1Q5VWZ2 237 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 LCN8Q6JVE9 175 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 METTL2BQ6P1Q9 378 aaKnown RBP16.86■□□□□ 0.29
SHOX-204ENST00000554971 FAM156AQ8NDB6 213 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 CD200R1Q8TD46 325 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 LRRC58Q96CX6 371 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 SCARF2Q96GP6 870 aaPredicted RBP16.86■□□□□ 0.29
SHOX-204ENST00000554971 GTPBP2Q9BX10 602 aaKnown RBP16.86■□□□□ 0.29
SHOX-204ENST00000554971 P2RY12Q9H244 342 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 GAREM1Q9H706 876 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 SLC52A3Q9NQ40 469 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 ACTR3BQ9P1U1 418 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 DHRS7Q9Y394 339 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 SLC30A1Q9Y6M5 507 aa16.86■□□□□ 0.29
SHOX-204ENST00000554971 CDC7O00311 574 aa16.85■□□□□ 0.29
SHOX-204ENST00000554971 PPP6CO00743 305 aa16.85■□□□□ 0.29
SHOX-204ENST00000554971 ITGALP20701 1170 aa16.85■□□□□ 0.29
SHOX-204ENST00000554971 ACRV1P26436 265 aa16.85■□□□□ 0.29
SHOX-204ENST00000554971 KCNK10P57789 538 aa16.85■□□□□ 0.29
SHOX-204ENST00000554971 SRP54P61011 504 aaKnown RBP16.85■□□□□ 0.29
SHOX-204ENST00000554971 ERVK-8P63133 956 aa16.85■□□□□ 0.29
SHOX-204ENST00000554971 PCBP2Q15366 365 aaKnown RBP eCLIP16.85■□□□□ 0.29
SHOX-204ENST00000554971 GPR33Q49SQ1 333 aa16.85■□□□□ 0.29
SHOX-204ENST00000554971 GPRIN3Q6ZVF9 776 aa16.85■□□□□ 0.29
SHOX-204ENST00000554971 ADAMTSL2Q86TH1 951 aa16.85■□□□□ 0.29
SHOX-204ENST00000554971 SERPINA9Q86WD7 417 aa16.85■□□□□ 0.29
SHOX-204ENST00000554971 SLC15A3Q8IY34 581 aa16.85■□□□□ 0.29
SHOX-204ENST00000554971 SLCO4A1Q96BD0 722 aa16.85■□□□□ 0.29
SHOX-204ENST00000554971 SLC45A3Q96JT2 553 aa16.85■□□□□ 0.29
SHOX-204ENST00000554971 BOCQ9BWV1 1114 aa16.85■□□□□ 0.29
SHOX-204ENST00000554971 ZDHHC5Q9C0B5 715 aa16.85■□□□□ 0.29
SHOX-204ENST00000554971 OR2AG1Q9H205 316 aa16.85■□□□□ 0.29
SHOX-204ENST00000554971 TRIM39Q9HCM9 518 aa16.85■□□□□ 0.29
SHOX-204ENST00000554971 VCX3AQ9NNX9 186 aa16.85■□□□□ 0.29
SHOX-204ENST00000554971 SEMA4BQ9NPR2 832 aaPredicted RBP16.85■□□□□ 0.29
SHOX-204ENST00000554971 DGKBQ9Y6T7 804 aa16.85■□□□□ 0.29
SHOX-204ENST00000554971 IGLV3-16A0A075B6K0 115 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 E5RI56 91 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 PRMT5O14744 637 aaPredicted RBP16.84■□□□□ 0.29
SHOX-204ENST00000554971 TNFRSF10CO14798 259 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 SGTAO43765 313 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 CLPTM1O96005 669 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 SYPP08247 313 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 LINC00032P0C843 101 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 FCGR1AP12314 374 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 ZNF8P17098 575 aaPredicted RBP16.84■□□□□ 0.29
SHOX-204ENST00000554971 CHRM3P20309 590 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 IL10P22301 178 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 HK3P52790 923 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 RCAN2Q14206 197 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 CTSL3PQ5NE16 218 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 ZNF547Q8IVP9 402 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 ALDH16A1Q8IZ83 802 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 DGCR14Q96DF8 476 aaKnown RBP16.84■□□□□ 0.29
SHOX-204ENST00000554971 LINGO1Q96FE5 620 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 KLQ9UEF7 1012 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 CRLS1Q9UJA2 301 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 PRKAB1Q9Y478 270 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 A0A1B0GTQ1 180 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 NPEPPSL1A6NEC2 478 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 LRRC14BA6NHZ5 514 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 SDC3O75056 442 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 EEDO75530 441 aaKnown RBP16.84■□□□□ 0.29
SHOX-204ENST00000554971 GPIP06744 558 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 CELA2BP08218 269 aaPredicted RBP16.84■□□□□ 0.29
SHOX-204ENST00000554971 UMPSP11172 480 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 CAPN3P20807 821 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 SLC6A2P23975 617 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 RXRGP48443 463 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 CTSCP53634 463 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 TMEM115Q12893 351 aaPredicted RBP16.84■□□□□ 0.29
SHOX-204ENST00000554971 BNIP3Q12983 259 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 TCEA2Q15560 299 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 VPS26BQ4G0F5 336 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 AASDHQ4L235 1098 aaPredicted RBP16.84■□□□□ 0.29
SHOX-204ENST00000554971 PPP4R4Q6NUP7 873 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 RNF165Q6ZSG1 346 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 ERMP1Q7Z2K6 904 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 RD3Q7Z3Z2 195 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 SYVN1Q86TM6 617 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 PTRH1Q86Y79 214 aaKnown RBP16.84■□□□□ 0.29
SHOX-204ENST00000554971 GALNT13Q8IUC8 556 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 HID1Q8IV36 788 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 EDEM2Q9BV94 578 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 TM7SF3Q9NS93 570 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 UBAP1Q9NZ09 502 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 CD274Q9NZQ7 290 aa16.84■□□□□ 0.29
SHOX-204ENST00000554971 LEF1Q9UJU2 399 aaPredicted RBP16.84■□□□□ 0.29
SHOX-204ENST00000554971 FAM234BA2RU67 622 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 ENO4A6NNW6 628 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 FXYD1O00168 92 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 E2F3O00716 465 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 NME4O00746 187 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 NUAK1O60285 661 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 OR1I1O60431 355 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 SLC22A3O75751 556 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms