RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 CDC7O00311 574 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 IFNA7P01567 189 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 RLN2P04090 185 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 YES1P07947 543 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 ZBTB48P10074 688 aaPredicted RBP13.61□□□□□ -0.23
VTI1B-204ENST00000554659 PLA2G16P53816 162 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 PRR23CQ6ZRP0 262 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 ASB18Q6ZVZ8 466 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 LMLNQ96KR4 655 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 RPL10LQ96L21 214 aaKnown RBP13.61□□□□□ -0.23
VTI1B-204ENST00000554659 PRRG4Q9BZD6 226 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 HS3ST4Q9Y661 456 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.61□□□□□ -0.23
VTI1B-204ENST00000554659 C9IYK1 514 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 TLL1O43897 1013 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 CD2P06729 351 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 H1F0P07305 194 aaKnown RBP13.6□□□□□ -0.23
VTI1B-204ENST00000554659 NCBP2P52298 156 aaKnown RBP eCLIP13.6□□□□□ -0.23
VTI1B-204ENST00000554659 GJA9P57773 515 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 SLBPQ14493 270 aaKnown RBP eCLIP13.6□□□□□ -0.23
VTI1B-204ENST00000554659 ZNF678Q5SXM1 525 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 ATP6V1C2Q8NEY4 427 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 HSPBAP1Q96EW2 488 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 RBM18Q96H35 190 aaKnown RBP13.6□□□□□ -0.23
VTI1B-204ENST00000554659 CNDP2Q96KP4 475 aaKnown RBP13.6□□□□□ -0.23
VTI1B-204ENST00000554659 PEBP4Q96S96 227 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 IRF2BPLQ9H1B7 796 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 MIR1-1HGQ9H1L0 117 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 RC3H2Q9HBD1 1191 aaKnown RBP13.6□□□□□ -0.23
VTI1B-204ENST00000554659 CHMP1AQ9HD42 196 aaPredicted RBP13.6□□□□□ -0.23
VTI1B-204ENST00000554659 ZCCHC3Q9NUD5 404 aaKnown RBP13.6□□□□□ -0.23
VTI1B-204ENST00000554659 FAM120CQ9NX05 1096 aaKnown RBP13.6□□□□□ -0.23
VTI1B-204ENST00000554659 RIMKLBQ9ULI2 386 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 CPNE3O75131 537 aaKnown RBP13.6□□□□□ -0.23
VTI1B-204ENST00000554659 ARCN1P48444 511 aaKnown RBP13.6□□□□□ -0.23
VTI1B-204ENST00000554659 STC1P52823 247 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 ZNF280AP59817 542 aaPredicted RBP13.6□□□□□ -0.23
VTI1B-204ENST00000554659 C1QTNF8P60827 252 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 RPS24P62847 133 aaKnown RBP13.6□□□□□ -0.23
VTI1B-204ENST00000554659 CD83Q01151 205 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 HFE2Q6ZVN8 426 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 FAM129CQ86XR2 697 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 FBXL20Q96IG2 436 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 NPY6RQ99463 290 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 TM9SF3Q9HD45 589 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 PLCL2Q9UPR0 1127 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 HEBP2Q9Y5Z4 205 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 C10orf71Q711Q0 1435 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 E7ESA3 106 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 B3GALT2O43825 422 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 CPN2P22792 545 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 MAN2A2P49641 1150 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 MLLT6P55198 1093 aaPredicted RBP13.6□□□□□ -0.23
VTI1B-204ENST00000554659 EIF5AP63241 154 aaKnown RBP13.6□□□□□ -0.23
VTI1B-204ENST00000554659 MPP2Q14168 576 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 ZNF404Q494X3 552 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 C4orf46Q504U0 113 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 ADGRF1Q5T601 910 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 CAND1Q86VP6 1230 aaKnown RBP13.6□□□□□ -0.23
VTI1B-204ENST00000554659 LMO3Q8TAP4 145 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 SUV39H2Q9H5I1 410 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 SH3D21A4FU49 640 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 J3KR12 359 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 J3QRK9 145 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 LINGO3P0C6S8 592 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 EBLN1P0CF75 366 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 G6PDP11413 515 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 MPIP34949 423 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 ARHGAP1Q07960 439 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 TREML1Q86YW5 311 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 ZNF548Q8NEK5 533 aaPredicted RBP13.6□□□□□ -0.23
VTI1B-204ENST00000554659 PYCR2Q96C36 320 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 FBXL8Q96CD0 374 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 SUSD3Q96L08 255 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 MSRAQ9UJ68 235 aa13.6□□□□□ -0.23
VTI1B-204ENST00000554659 TRBC2A0A5B9 178 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 TRIM64CA6NLI5 447 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 KCNE1P15382 129 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 GBX2P52951 348 aaPredicted RBP13.59□□□□□ -0.23
VTI1B-204ENST00000554659 RABL3Q5HYI8 236 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 PRAMEF17Q5VTA0 474 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 SLC22A16Q86VW1 577 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 TRIM43Q96BQ3 446 aaPredicted RBP13.59□□□□□ -0.23
VTI1B-204ENST00000554659 MINDY3Q9H8M7 445 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 KANTRA0A1W2PQU2 76 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 H0YAE9 185 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 OR7A10O76100 309 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 ACVR2AP27037 513 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 DGKGP49619 791 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 CCR8P51685 355 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 ILF3Q12906 894 aaKnown RBP eCLIP13.59□□□□□ -0.23
VTI1B-204ENST00000554659 NOGQ13253 232 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 SMU1Q2TAY7 513 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 OGFRL1Q5TC84 451 aaPredicted RBP13.59□□□□□ -0.23
VTI1B-204ENST00000554659 PHC2Q8IXK0 858 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 CCDC54Q8NEL0 328 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 KXD1Q9BQD3 176 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 LGR4Q9BXB1 951 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 ABCB8Q9NUT2 735 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 C14orf105Q9NVL8 296 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms