RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 B4GALNT4Q76KP1 1039 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 TRIM74Q86UV6 250 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 C17orf82Q86X59 251 aaPredicted RBP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 PPP1R3BQ86XI6 285 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 GKN2Q86XP6 184 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 NRROSQ86YC3 692 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 CCDC170Q8IYT3 715 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 KATNAL2Q8IYT4 538 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 SDR16C5Q8N3Y7 309 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 LPCAT1Q8NF37 534 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 NAT6Q93015 286 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 AP2M1Q96CW1 435 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 IMP4Q96G21 291 aaKnown RBP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 PRR11Q96HE9 360 aaPredicted RBP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 COX14Q96I36 57 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 QKIQ96PU8 341 aaKnown RBP eCLIP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 PANX2Q96RD6 677 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 CCDC3Q9BQI4 270 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 HERPUD2Q9BSE4 406 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 ACTRT3Q9BYD9 372 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 TINAGL1Q9GZM7 467 aaPredicted RBP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 SLC25A51Q9H1U9 297 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 PCDH9Q9HC56 1237 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 SIDT1Q9NXL6 827 aaKnown RBP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 ETAA1Q9NY74 926 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 DDX56Q9NY93 547 aaKnown RBP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 NCKIPSDQ9NZQ3 722 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 NFKBIL1Q9UBC1 381 aaPredicted RBP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 CD84Q9UIB8 345 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 RALYQ9UKM9 306 aaKnown RBP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 DNPEPQ9ULA0 475 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 SUFUQ9UMX1 484 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 RPL26L1Q9UNX3 145 aaKnown RBP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 GPR34Q9UPC5 381 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 CHKBQ9Y259 395 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 TTLL3Q9Y4R7 772 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 HEY1Q9Y5J3 304 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 PCYT1BQ9Y5K3 369 aaPredicted RBP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 ENTPD2Q9Y5L3 495 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 ALG6Q9Y672 507 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 A0A0U1RQJ8 604 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 GOLGA6CA6NDK9 693 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 GOLGA6BA6NDN3 693 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 BTNL10A8MVZ5 291 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 B4DGG1 531 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 D6RAR5 112 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 H3BUI4 141 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 PROM1O43490 865 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 CST8O60676 142 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 USP12O75317 370 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 TCEA3O75764 348 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 CLDN7O95471 211 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 NDST3O95803 873 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 RPLP0P05388 317 aaKnown RBP4.09□□□□□ -1.75
VTI1B-203ENST00000554636 PYGLP06737 847 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 GOLGA6DP0CG33 693 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 NR2F6P10588 404 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 PF4V1P10720 104 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 TNNT1P13805 278 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 CTSEP14091 401 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 ITGALP20701 1170 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 CA4P22748 312 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 LMO1P25800 156 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 NFKBIAP25963 317 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 CTNNA2P26232 953 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 AK4P27144 223 aaPredicted RBP4.09□□□□□ -1.75
VTI1B-203ENST00000554636 CTNNA1P35221 906 aaKnown RBP4.09□□□□□ -1.75
VTI1B-203ENST00000554636 CYLC1P35663 651 aaPredicted RBP4.09□□□□□ -1.75
VTI1B-203ENST00000554636 EIF2S3P41091 472 aaKnown RBP4.09□□□□□ -1.75
VTI1B-203ENST00000554636 GRIA3P42263 894 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 GPR1P46091 355 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 GNPDA1P46926 289 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 POLD2P49005 469 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 NR2C2P49116 596 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 SPINT3P49223 89 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 EPHB1P54762 984 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 MAZP56270 477 aaKnown RBP4.09□□□□□ -1.75
VTI1B-203ENST00000554636 DCDC1P59894 354 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 CCL7P80098 99 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 AP1B1Q10567 949 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 WASHC5Q12768 1159 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 HABP2Q14520 560 aaPredicted RBP4.09□□□□□ -1.75
VTI1B-203ENST00000554636 NR1D2Q14995 579 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 LLGL1Q15334 1064 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 C14orf28Q4W4Y0 310 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 RBM20Q5T481 1227 aaKnown RBP4.09□□□□□ -1.75
VTI1B-203ENST00000554636 CERCAMQ5T4B2 595 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 HENMT1Q5T8I9 393 aaKnown RBP4.09□□□□□ -1.75
VTI1B-203ENST00000554636 THEMIS2Q5TEJ8 643 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 DOK6Q6PKX4 331 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 BBS12Q6ZW61 710 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 TMPRSS9Q7Z410 1059 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 TAF8Q7Z7C8 310 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 NT5DC3Q86UY8 548 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 FAM90A1Q86YD7 464 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 PDSS2Q86YH6 399 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 TMEM139Q8IV31 216 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 RAVER1Q8IY67 606 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms