RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 ZSCAN32Q9NX65 697 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 SLAMF8Q9P0V8 285 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 PCOLCE2Q9UKZ9 415 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF490Q9ULM2 529 aaPredicted RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 GPR34Q9UPC5 381 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 PKP3Q9Y446 797 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 KCTD3Q9Y597 815 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 PCDHB14Q9Y5E9 798 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 TRPM6Q9BX84 2022 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 TNFSF14O43557 240 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 RAMP2O60895 175 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 KCNJ13O60928 360 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 SOAT2O75908 522 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 STAMBPO95630 424 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 IGLV3-19P01714 112 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 BCKDHAP12694 445 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 HK1P19367 917 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 SLC2A5P22732 501 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 HOXD10P28358 340 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 RPS5P46782 204 aaKnown RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 ATN1P54259 1190 aaPredicted RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 ESRRGP62508 458 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 REEP5Q00765 189 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 TSPY1Q01534 308 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 IFITM2Q01629 132 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 CD47Q08722 323 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 SREBF2Q12772 1141 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 ILKQ13418 452 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 ISXQ2M1V0 245 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 HSD17B12Q53GQ0 312 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 PRAMEF18Q5VWM3 479 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 SLC30A6Q6NXT4 461 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 METAP1DQ6UB28 335 aaPredicted RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 CRTC1Q6UUV9 634 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 SLCO4C1Q6ZQN7 724 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 TPRG1Q6ZUI0 275 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 IGFN1Q86VF2 1251 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 RBFAQ8N0V3 343 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 PCDH20Q8N6Y1 951 aaKnown RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 HJURPQ8NCD3 748 aaPredicted RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 DUSP18Q8NEJ0 188 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 OR13C4Q8NGS5 318 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 NT5CQ8TCD5 201 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 CSGALNACT1Q8TDX6 532 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 RILPQ96NA2 401 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 QRFPRQ96P65 431 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 DDX50Q9BQ39 737 aaKnown RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 EFHD1Q9BUP0 239 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 HOXD1Q9GZZ0 328 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 FAM49AQ9H0Q0 323 aaPredicted RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 MMP27Q9H306 513 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 TOR3AQ9H497 397 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 NOL11Q9H8H0 719 aaKnown RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 PFDN4Q9NQP4 134 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 KCTD5Q9NXV2 234 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 PDE10AQ9Y233 779 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 FADS3Q9Y5Q0 445 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 LYVE1Q9Y5Y7 322 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 GPC6Q9Y625 555 aaPredicted RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 MYO10Q9HD67 2058 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 TNRC6AQ8NDV7 1962 aaKnown RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 A0A0A6YYD5 115 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 LOC100130705A0A1B0GUX0 176 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 C16orf96A6NNT2 1141 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 MYO1GB0I1T2 1018 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 F8W810 466 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 AQP9O43315 295 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 MSI1O43347 362 aaKnown RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 NOBOXO60393 691 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 B4GALT2O60909 372 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 AOC2O75106 756 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 SKAP2O75563 359 aaPredicted RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 NEBLO76041 1014 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 PRAMEF12O95522 483 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 SNAP29O95721 258 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 TGFB1P01137 390 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 MELTFP08582 738 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 FURINP09958 794 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 CPEP16870 476 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF8P17098 575 aaPredicted RBP3.33□□□□□ -1.88
SEC23A-207ENST00000554615 LHCGRP22888 699 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 MMP12P39900 470 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 BRCC3P46736 316 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 GPR15P49685 360 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 HTR6P50406 440 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 PRKG2Q13237 762 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF846Q147U1 533 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 KCNA10Q16322 511 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 MAP7D1Q3KQU3 841 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF628Q5EBL2 1059 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 KCTD8Q6ZWB6 473 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 TRIM69Q86WT6 500 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 RNF130Q86XS8 419 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 DDIASQ8IXT1 998 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 FBXO39Q8N4B4 442 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 FAM26EQ8N5C1 309 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 SLC25A41Q8N5S1 370 aa3.33□□□□□ -1.88
SEC23A-207ENST00000554615 ZBTB2Q8N680 514 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms