RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 POPDC3Q9HBV1 291 aa13.52□□□□□ -0.25
SPTLC2-202ENST00000554365 SLAMF7Q9NQ25 335 aa13.52□□□□□ -0.25
SPTLC2-202ENST00000554365 NOVA2Q9UNW9 492 aaKnown RBP13.52□□□□□ -0.25
SPTLC2-202ENST00000554365 DHRS7Q9Y394 339 aa13.52□□□□□ -0.25
SPTLC2-202ENST00000554365 DNMT3AQ9Y6K1 912 aaPredicted RBP13.52□□□□□ -0.25
SPTLC2-202ENST00000554365 GOLGA6L10A6NI86 522 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 TCP11X1B4DZS4 312 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 GOLGA8RI6L899 631 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 MEN1O00255 615 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 QSOX1O00391 747 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 VPS26AO75436 327 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 TSPAN12O95859 305 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 PYGBP11216 843 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 STMN1P16949 149 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 CHRM3P20309 590 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 CRABP2P29373 138 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 TYK2P29597 1187 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 KPNA2P52292 529 aaKnown RBP13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 IRF9Q00978 393 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 DLG1Q12959 904 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 KRT33BQ14525 404 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 METRNLQ641Q3 311 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 PAQR3Q6TCH7 311 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 NAPRTQ6XQN6 538 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 ZNF517Q6ZMY9 492 aaPredicted RBP13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 SRRM1Q8IYB3 904 aaKnown RBP13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 CENPLQ8N0S6 344 aaPredicted RBP13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 C4orf33Q8N1A6 199 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 PLD6Q8N2A8 252 aaKnown RBP13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 LILRA3Q8N6C8 439 aaPredicted RBP13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 FDCSPQ8NFU4 85 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 SPDYE1Q8NFV5 336 aaPredicted RBP13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 PRR7Q8TB68 274 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 ACMSDQ8TDX5 336 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 ANKRD49Q8WVL7 239 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 TSPAN17Q96FV3 270 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 PANX3Q96QZ0 392 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 CCM2Q9BSQ5 444 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 NUDT9Q9BW91 350 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 SLC29A3Q9BZD2 475 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 FANCEQ9HB96 536 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 CUEDC1Q9NWM3 386 aaPredicted RBP13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 FAM53CQ9NYF3 392 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 TAS2R13Q9NYV9 303 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 KLHL42Q9P2K6 505 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 TCFL5Q9UL49 500 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 CDYLQ9Y232 598 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 PCDHGB7Q9Y5F8 929 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 ICE1Q9Y2F5 2266 aa13.51□□□□□ -0.25
SPTLC2-202ENST00000554365 A0A096LPK6 155 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 SLC5A10A0PJK1 596 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 MGAT4DA6NG13 374 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 SLC9B1P1A6NJY1 282 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 CEACAM4O75871 244 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 FTH1P02794 183 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 RAB40ALP0C0E4 278 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 SLC35G4P0C7Q5 338 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 ZNF37AP17032 561 aaPredicted RBP13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 KRT4P19013 534 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 POLR2CP19387 275 aaPredicted RBP13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 CDH3P22223 829 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 MAGOHP61326 146 aaKnown RBP13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 ABRQ12979 859 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 PRKAA1Q13131 559 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 ACSBG2Q5FVE4 666 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 PLEKHS1Q5SXH7 462 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 SLC6A19Q695T7 634 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 CDHR3Q6ZTQ4 885 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 DSELQ8IZU8 1212 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 CARFQ8N187 725 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 BANPQ8N9N5 519 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 Q8NA96 180 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 OR4E2Q8NGC2 313 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 ADAMTS17Q8TE56 1095 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 INPP5DQ92835 1189 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 PKNOX2Q96KN3 472 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 UBXN10Q96LJ8 280 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 LRFN5Q96NI6 719 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 GPR78Q96P69 363 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 NLNQ9BYT8 704 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 SLC7A5P2Q9GIP4 190 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 KIR3DX1Q9H7L2 352 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 IGSF5Q9NSI5 407 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 PCMTD2Q9NV79 361 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 MKS1Q9NXB0 559 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 TRMT6Q9UJA5 497 aaKnown RBP13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 IKZF3Q9UKT9 509 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 ACSL5Q9ULC5 683 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 BTRCQ9Y297 605 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 ACTL7BQ9Y614 415 aa13.5□□□□□ -0.25
SPTLC2-202ENST00000554365 SPTBN1Q01082 2364 aaKnown RBP13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 E5RI56 91 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 TYROBPO43914 113 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 GPC4O75487 556 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 CYP2A7P20853 494 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 ATP5DP30049 168 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 SKIV2L2P42285 1042 aaKnown RBP13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 SLC12A2P55011 1212 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 ITGA1P56199 1179 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 PDAP1Q13442 181 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms