RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 EPN3Q9H201 632 aa6.5□□□□□ -1.37
LINC00517-202ENST00000554257 FARSBQ9NSD9 589 aaKnown RBP6.5□□□□□ -1.37
LINC00517-202ENST00000554257 DNAJC11Q9NVH1 559 aa6.5□□□□□ -1.37
LINC00517-202ENST00000554257 ACTR10Q9NZ32 417 aa6.5□□□□□ -1.37
LINC00517-202ENST00000554257 RAPGEFL1Q9UHV5 662 aa6.5□□□□□ -1.37
LINC00517-202ENST00000554257 MOSPD1Q9UJG1 213 aa6.5□□□□□ -1.37
LINC00517-202ENST00000554257 PTGDR2Q9Y5Y4 395 aa6.5□□□□□ -1.37
LINC00517-202ENST00000554257 TRBV23OR9-2A0A075B6M9 112 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 A0A1W2PNU3 283 aaPredicted RBP6.49□□□□□ -1.37
LINC00517-202ENST00000554257 HAT1O14929 419 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 MED26O95402 600 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 GP1BAP07359 652 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 ANXA6P08133 673 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 ANKRD34CP0C6C1 535 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 CD1EP15812 388 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 ARRB1P49407 418 aaPredicted RBP6.49□□□□□ -1.37
LINC00517-202ENST00000554257 PKNOX1P55347 436 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 OR1D5P58170 312 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 RAE1P78406 368 aaKnown RBP6.49□□□□□ -1.37
LINC00517-202ENST00000554257 BTKQ06187 659 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 ZFP36L1Q07352 338 aaKnown RBP6.49□□□□□ -1.37
LINC00517-202ENST00000554257 GPS2Q13227 327 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 STX3Q13277 289 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 HHATQ5VTY9 493 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 Q6ZSR9 355 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 VN1R4Q7Z5H5 301 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 UBE3DQ7Z6J8 389 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 MTERF4Q7Z6M4 381 aaKnown RBP6.49□□□□□ -1.37
LINC00517-202ENST00000554257 CLNKQ7Z7G1 428 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 DNAJC22Q8N4W6 341 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 TEX9Q8N6V9 391 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 GOLGA6L1Q8N7Z2 621 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 TRPC4APQ8TEL6 797 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 FOPNLQ96NB1 174 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 IPPKQ9H8X2 491 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 SEMA4BQ9NPR2 832 aaPredicted RBP6.49□□□□□ -1.37
LINC00517-202ENST00000554257 SLC52A3Q9NQ40 469 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 SIDT1Q9NXL6 827 aaKnown RBP6.49□□□□□ -1.37
LINC00517-202ENST00000554257 PDZK1P1A8MUH7 402 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 SDHDO14521 159 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 PRAMEF10O60809 474 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 FKBP9O95302 570 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 GFERP55789 205 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 TBL3Q12788 808 aaKnown RBP6.49□□□□□ -1.37
LINC00517-202ENST00000554257 NR0B2Q15466 257 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 FRA10AC1Q70Z53 315 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 LARP4Q71RC2 724 aaKnown RBP eCLIP6.49□□□□□ -1.37
LINC00517-202ENST00000554257 ARHGAP22Q7Z5H3 698 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 NAXDQ8IW45 347 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 CARFQ8N187 725 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 AVL9Q8NBF6 648 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 ZNF740Q8NDX6 193 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 OR4E2Q8NGC2 313 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 SLC5A11Q8WWX8 675 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 TRAPPC9Q96Q05 1148 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 OR2A5Q96R48 311 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 SLC29A3Q9BZD2 475 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 IRF2BPLQ9H1B7 796 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 FAM60AQ9NP50 221 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 CCDC177Q9NQR7 707 aaPredicted RBP6.49□□□□□ -1.37
LINC00517-202ENST00000554257 LRIT1Q9P2V4 623 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 BTRCQ9Y297 605 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 TDRKHQ9Y2W6 561 aaKnown RBP6.49□□□□□ -1.37
LINC00517-202ENST00000554257 SDK2Q58EX2 2172 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 OR6C74A6NCV1 312 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 LSM1O15116 133 aaKnown RBP6.49□□□□□ -1.37
LINC00517-202ENST00000554257 FLRT2O43155 660 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 OR4F21O95013 312 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 MLYCDO95822 493 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 ENO1P06733 434 aaKnown RBP6.49□□□□□ -1.37
LINC00517-202ENST00000554257 C1GALT1C1LP0DN25 315 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 THRAP10827 490 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 CDH1P12830 882 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 GFAPP14136 432 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 BCL6P41182 706 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 HK2P52789 917 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 ABRAXAS2Q15018 415 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 NKAIN2Q5VXU1 208 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 CLEC6AQ6EIG7 209 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 WDR75Q8IWA0 830 aaKnown RBP6.49□□□□□ -1.37
LINC00517-202ENST00000554257 CPAMD8Q8IZJ3 1885 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 SHISA5Q8N114 240 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 RNF175Q8N4F7 328 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 EID2Q8N6I1 236 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 BMPERQ8N8U9 685 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 NT5CQ8TCD5 201 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 PTCD3Q96EY7 689 aaKnown RBP6.49□□□□□ -1.37
LINC00517-202ENST00000554257 SLC41A2Q96JW4 573 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 TSNARE1Q96NA8 513 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 PITHD1Q9GZP4 211 aaPredicted RBP6.49□□□□□ -1.37
LINC00517-202ENST00000554257 MYLK2Q9H1R3 596 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 ZNF768Q9H5H4 540 aaKnown RBP6.49□□□□□ -1.37
LINC00517-202ENST00000554257 FGFR1OP2Q9NVK5 253 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 WWOXQ9NZC7 414 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 OPTCQ9UBM4 332 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 TAC3Q9UHF0 121 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 PADI4Q9UM07 663 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 PCDHB11Q9Y5F2 797 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 ENTPD2Q9Y5L3 495 aa6.49□□□□□ -1.37
LINC00517-202ENST00000554257 IGHV5-51A0A0C4DH38 117 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms