RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 AGAP4Q96P64 663 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 LMF1Q96S06 567 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 MIPEPQ99797 713 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 ZFYVE21Q9BQ24 234 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 WDR77Q9BQA1 342 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-203ENST00000554074 PLCD4Q9BRC7 762 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 DPH7Q9BTV6 452 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 MFRPQ9BY79 579 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 LHPPQ9H008 270 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 ILKAPQ9H0C8 392 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-203ENST00000554074 ZNF304Q9HCX3 659 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 MRPS30Q9NP92 439 aaKnown RBP6.31□□□□□ -1.4
SLIRP-203ENST00000554074 CTSFQ9UBX1 484 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 ZNF282Q9UDV7 671 aaPredicted RBP6.31□□□□□ -1.4
SLIRP-203ENST00000554074 CIDEBQ9UHD4 219 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 FBXL4Q9UKA2 621 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 CDC14AQ9UNH5 594 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 RUVBL2Q9Y230 463 aaKnown RBP6.31□□□□□ -1.4
SLIRP-203ENST00000554074 CRYL1Q9Y2S2 319 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 NEU2Q9Y3R4 380 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 PCDHGA10Q9Y5H3 936 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 COMMD10Q9Y6G5 202 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 TEX15Q9BXT5 2789 aa6.31□□□□□ -1.4
SLIRP-203ENST00000554074 NOTCH2Q04721 2471 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 LOC105369274A0A096LPK9 316 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 IGKV1-8A0A0C4DH67 115 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 LOC102723532A0A0G2JNH3 316 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 A0A0J9YVX5 310 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 ZCWPW2A0A1B0GU75 182 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 GOLGA8KD6RF30 607 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 E7ENX8 843 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 H0YGG7 62 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 GOLGA8TH3BQL2 631 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 CCDC188H7C350 402 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 GFYI3L273 518 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 SEMA7AO75326 666 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 AVILO75366 819 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 USP1O94782 785 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 MED26O95402 600 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 CBX6O95503 412 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 KRT14P02533 472 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 CYC1P08574 325 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 ZGLP1P0C6A0 271 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 ERVK-10P10266 1014 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 ACPPP15309 386 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 EZRP15311 586 aaKnown RBP6.3□□□□□ -1.4
SLIRP-203ENST00000554074 CHRM3P20309 590 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 FDXRP22570 491 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 HRH2P25021 359 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 ITGA3P26006 1051 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 CXCR5P32302 372 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 RPA3P35244 121 aaPredicted RBP6.3□□□□□ -1.4
SLIRP-203ENST00000554074 SKIV2L2P42285 1042 aaKnown RBP6.3□□□□□ -1.4
SLIRP-203ENST00000554074 TSFMP43897 325 aaKnown RBP6.3□□□□□ -1.4
SLIRP-203ENST00000554074 OR1D4P47884 311 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 FNTAP49354 379 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 PNLIPRP1P54315 467 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 FOXL2P58012 376 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 ARF3P61204 181 aaPredicted RBP6.3□□□□□ -1.4
SLIRP-203ENST00000554074 TAP2Q03519 686 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 OCA2Q04671 838 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 PRDX1Q06830 199 aaKnown RBP6.3□□□□□ -1.4
SLIRP-203ENST00000554074 KLC1Q07866 573 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 RAPSNQ13702 412 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 DSG2Q14126 1118 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 DHX34Q14147 1143 aaKnown RBP6.3□□□□□ -1.4
SLIRP-203ENST00000554074 FAM53BQ14153 422 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 FASTKQ14296 549 aaKnown RBP6.3□□□□□ -1.4
SLIRP-203ENST00000554074 RBBP7Q16576 425 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 KLHL38Q2WGJ6 581 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 ACSBG2Q5FVE4 666 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 ICE2Q659A1 982 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 ATG9BQ674R7 924 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 ZNF470Q6ECI4 717 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 FRMPD2BQ6IN97 320 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 LRRC8EQ6NSJ5 796 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 RPUSD3Q6P087 351 aaKnown RBP6.3□□□□□ -1.4
SLIRP-203ENST00000554074 CASC4Q6P4E1 433 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 CES3Q6UWW8 571 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 ISLR2Q6UXK2 745 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 CUZD1Q86UP6 607 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 PAQR7Q86WK9 346 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 TMEM151BQ8IW70 566 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 OR4N4Q8N0Y3 316 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 ARHGEF39Q8N4T4 335 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 ST6GALNAC3Q8NDV1 305 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 STT3BQ8TCJ2 826 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.3□□□□□ -1.4
SLIRP-203ENST00000554074 ASB11Q8WXH4 323 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 INPP5DQ92835 1189 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 MAGOHBQ96A72 148 aaKnown RBP6.3□□□□□ -1.4
SLIRP-203ENST00000554074 ZNF669Q96BR6 464 aaPredicted RBP6.3□□□□□ -1.4
SLIRP-203ENST00000554074 MIEF2Q96C03 454 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 C10orf90Q96M02 699 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 SERPINB12Q96P63 405 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 OR2A5Q96R48 311 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 PKP4Q99569 1192 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 EBNA1BP2Q99848 306 aaKnown RBP6.3□□□□□ -1.4
SLIRP-203ENST00000554074 CRB3Q9BUF7 120 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 TGIF2Q9GZN2 237 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms