RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 NFKB2Q00653 900 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 POU4F1Q01851 419 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 IL10RAQ13651 578 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 NCF4Q15080 339 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 PPP1R3AQ16821 1122 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 ZXDCQ2QGD7 858 aaPredicted RBP19.5■□□□□ 0.71
FOXA1-203ENST00000553751 GLE1Q53GS7 698 aaKnown RBP19.5■□□□□ 0.71
FOXA1-203ENST00000553751 THEMIS2Q5TEJ8 643 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 PRAMEF13Q5VWM6 474 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 FBXO42Q6P3S6 717 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 SYVN1Q86TM6 617 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 CTAGE3PQ8IX95 158 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 OR4N4Q8N0Y3 316 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 NKAPQ8N5F7 415 aaKnown RBP19.5■□□□□ 0.71
FOXA1-203ENST00000553751 FBF1Q8TES7 1133 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 ANKRD49Q8WVL7 239 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 GPR22Q99680 433 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 ARHGAP9Q9BRR9 750 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 FAM129AQ9BZQ8 928 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 ATG10Q9H0Y0 220 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 CAB39LQ9H9S4 337 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 TXLNGQ9NUQ3 528 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 TXNDC16Q9P2K2 825 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 HEATR5BQ9P2D3 2071 aa19.5■□□□□ 0.71
FOXA1-203ENST00000553751 HIST1H2AGP0C0S8 130 aaPredicted RBP19.49■□□□□ 0.71
FOXA1-203ENST00000553751 HIST1H2ADP20671 130 aa19.49■□□□□ 0.71
FOXA1-203ENST00000553751 ITGAXP20702 1163 aa19.49■□□□□ 0.71
FOXA1-203ENST00000553751 ECHS1P30084 290 aa19.49■□□□□ 0.71
FOXA1-203ENST00000553751 ARSFP54793 590 aa19.49■□□□□ 0.71
FOXA1-203ENST00000553751 DCDP81605 110 aaKnown RBP19.49■□□□□ 0.71
FOXA1-203ENST00000553751 GRM7Q14831 915 aa19.49■□□□□ 0.71
FOXA1-203ENST00000553751 EFTUD2Q15029 972 aaKnown RBP eCLIP19.49■□□□□ 0.711e-6■■■□□ 15.3
FOXA1-203ENST00000553751 UGT8Q16880 541 aa19.49■□□□□ 0.71
FOXA1-203ENST00000553751 DEFB109BQ30KR1 87 aa19.49■□□□□ 0.71
FOXA1-203ENST00000553751 WASHC2DQ5SRD0 308 aa19.49■□□□□ 0.71
FOXA1-203ENST00000553751 FAM69BQ5VUD6 431 aa19.49■□□□□ 0.71
FOXA1-203ENST00000553751 TTLL10Q6ZVT0 673 aa19.49■□□□□ 0.71
FOXA1-203ENST00000553751 ANKRD7Q92527 254 aa19.49■□□□□ 0.71
FOXA1-203ENST00000553751 MED8Q96G25 268 aa19.49■□□□□ 0.71
FOXA1-203ENST00000553751 HIST1H2AHQ96KK5 128 aa19.49■□□□□ 0.71
FOXA1-203ENST00000553751 HIST1H2AJQ99878 128 aa19.49■□□□□ 0.71
FOXA1-203ENST00000553751 H2AFJQ9BTM1 129 aa19.49■□□□□ 0.71
FOXA1-203ENST00000553751 SGPP1Q9BX95 441 aa19.49■□□□□ 0.71
FOXA1-203ENST00000553751 GPAMQ9HCL2 828 aa19.49■□□□□ 0.71
FOXA1-203ENST00000553751 CUTCQ9NTM9 273 aa19.49■□□□□ 0.71
FOXA1-203ENST00000553751 ARL15Q9NXU5 204 aa19.49■□□□□ 0.71
FOXA1-203ENST00000553751 TCFL5Q9UL49 500 aa19.49■□□□□ 0.71
FOXA1-203ENST00000553751 NOVA2Q9UNW9 492 aaKnown RBP19.49■□□□□ 0.71
FOXA1-203ENST00000553751 SH2B3Q9UQQ2 575 aa19.49■□□□□ 0.71
FOXA1-203ENST00000553751 ANKRD12Q6UB98 2062 aa19.48■□□□□ 0.71
FOXA1-203ENST00000553751 A0A1B0GX78 115 aa19.48■□□□□ 0.71
FOXA1-203ENST00000553751 NPEPPSL1A6NEC2 478 aa19.48■□□□□ 0.71
FOXA1-203ENST00000553751 EIF4E1BA6NMX2 242 aaKnown RBP19.48■□□□□ 0.71
FOXA1-203ENST00000553751 C9J4A7 227 aa19.48■□□□□ 0.71
FOXA1-203ENST00000553751 CDC7O00311 574 aa19.48■□□□□ 0.71
FOXA1-203ENST00000553751 EZRP15311 586 aaKnown RBP19.48■□□□□ 0.71
FOXA1-203ENST00000553751 POLE2P56282 527 aa19.48■□□□□ 0.71
FOXA1-203ENST00000553751 NAB1Q13506 487 aa19.48■□□□□ 0.71
FOXA1-203ENST00000553751 NAE1Q13564 534 aa19.48■□□□□ 0.71
FOXA1-203ENST00000553751 UBAP2Q5T6F2 1119 aaKnown RBP19.48■□□□□ 0.71
FOXA1-203ENST00000553751 YOD1Q5VVQ6 348 aaPredicted RBP19.48■□□□□ 0.71
FOXA1-203ENST00000553751 RELL1Q8IUW5 271 aa19.48■□□□□ 0.71
FOXA1-203ENST00000553751 PPM1NQ8N819 430 aa19.48■□□□□ 0.71
FOXA1-203ENST00000553751 CEP112Q8N8E3 955 aa19.48■□□□□ 0.71
FOXA1-203ENST00000553751 TTC29Q8NA56 475 aaPredicted RBP19.48■□□□□ 0.71
FOXA1-203ENST00000553751 DHRS4Q9BTZ2 278 aa19.48■□□□□ 0.71
FOXA1-203ENST00000553751 PCBD2Q9H0N5 130 aa19.48■□□□□ 0.71
FOXA1-203ENST00000553751 UTP6Q9NYH9 597 aaKnown RBP19.48■□□□□ 0.71
FOXA1-203ENST00000553751 MTRF1LQ9UGC7 380 aaKnown RBP19.48■□□□□ 0.71
FOXA1-203ENST00000553751 SNX7Q9UNH6 387 aa19.48■□□□□ 0.71
FOXA1-203ENST00000553751 POLHQ9Y253 713 aa19.48■□□□□ 0.71
FOXA1-203ENST00000553751 PABPN1LA6NDY0 278 aaKnown RBP19.47■□□□□ 0.71
FOXA1-203ENST00000553751 H0YGG7 62 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 HAT1O14929 419 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 DSCR3O14972 297 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 FAM155BO75949 473 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 CCND1P24385 295 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 CCR10P46092 362 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 SLC12A2P55011 1212 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 ARF3P61204 181 aaPredicted RBP19.47■□□□□ 0.71
FOXA1-203ENST00000553751 RELAQ04206 551 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 USP10Q14694 798 aaKnown RBP19.47■□□□□ 0.71
FOXA1-203ENST00000553751 SLC9A5Q14940 896 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 ZKSCAN8Q15776 578 aaPredicted RBP19.47■□□□□ 0.71
FOXA1-203ENST00000553751 NKAIN1Q4KMZ8 207 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 GRTP1Q5TC63 336 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 ADCK2Q7Z695 626 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 OR56A3Q8NH54 315 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 ADAMTS17Q8TE56 1095 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 FBXL8Q96CD0 374 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 TSPAN17Q96FV3 270 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 OR2A5Q96R48 311 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 C17orf62Q9BQA9 187 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 TRIM54Q9BYV2 358 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 SLC22A11Q9NSA0 550 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 NINJ2Q9NZG7 142 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 KCNMB2Q9Y691 235 aa19.47■□□□□ 0.71
FOXA1-203ENST00000553751 SPTA1P02549 2419 aa19.46■□□□□ 0.71
FOXA1-203ENST00000553751 COL6A6A6NMZ7 2263 aa19.46■□□□□ 0.71
FOXA1-203ENST00000553751 H7BY64 318 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms