RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ADIPOR2Q86V24 386 aa3.27□□□□□ -1.89
SCFD1-210ENST00000553693 GUF1Q8N442 669 aaKnown RBP3.27□□□□□ -1.89
SCFD1-210ENST00000553693 CCDC89Q8N998 374 aa3.27□□□□□ -1.89
SCFD1-210ENST00000553693 POC5Q8NA72 575 aa3.27□□□□□ -1.89
SCFD1-210ENST00000553693 PTPMT1Q8WUK0 201 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-210ENST00000553693 LPGAT1Q92604 370 aa3.27□□□□□ -1.89
SCFD1-210ENST00000553693 SLAMF9Q96A28 289 aa3.27□□□□□ -1.89
SCFD1-210ENST00000553693 TREX2Q9BQ50 279 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-210ENST00000553693 RPP25Q9BUL9 199 aaKnown RBP3.27□□□□□ -1.89
SCFD1-210ENST00000553693 TEX12Q9BXU0 123 aa3.27□□□□□ -1.89
SCFD1-210ENST00000553693 EQTNQ9NQ60 294 aa3.27□□□□□ -1.89
SCFD1-210ENST00000553693 RARRES3Q9UL19 164 aa3.27□□□□□ -1.89
SCFD1-210ENST00000553693 SRCAPQ6ZRS2 3230 aa3.27□□□□□ -1.89
SCFD1-210ENST00000553693 LRRC7Q96NW7 1537 aa3.27□□□□□ -1.89
SCFD1-210ENST00000553693 KIDINS220Q9ULH0 1771 aa3.27□□□□□ -1.89
SCFD1-210ENST00000553693 A2ML1A8K2U0 1454 aa3.27□□□□□ -1.89
SCFD1-210ENST00000553693 SETD1AO15047 1707 aaKnown RBP3.27□□□□□ -1.89
SCFD1-210ENST00000553693 SUPT6HQ7KZ85 1726 aaKnown RBP3.27□□□□□ -1.89
SCFD1-210ENST00000553693 CLTCQ00610 1675 aaKnown RBP3.27□□□□□ -1.89
SCFD1-210ENST00000553693 SPAG9O60271 1321 aaKnown RBP3.26□□□□□ -1.89
SCFD1-210ENST00000553693 GPR75-ASB3A0A0A6YYF3 556 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 A0A1W2PQ09 198 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 ASB14A6NK59 587 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 AGAP14A8MT82 685 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 O00370 1275 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 MEIS2O14770 477 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 IPO8O15397 1037 aaKnown RBP3.26□□□□□ -1.89
SCFD1-210ENST00000553693 TSPAN9O75954 239 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 IGHEP01854 428 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 LDHCP07864 332 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 HAPLN1P10915 354 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-210ENST00000553693 DARSP14868 501 aaKnown RBP3.26□□□□□ -1.89
SCFD1-210ENST00000553693 LBX1P52954 281 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 MAT1AQ00266 395 aaKnown RBP3.26□□□□□ -1.89
SCFD1-210ENST00000553693 KLC1Q07866 573 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 ZNF415Q09FC8 603 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 ZNF74Q16587 644 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 CA9Q16790 459 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 SYT14P1Q58G82 188 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 IGSF11Q5DX21 431 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 SLC25A30Q5SVS4 291 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 RNASEH2BQ5TBB1 312 aaKnown RBP3.26□□□□□ -1.89
SCFD1-210ENST00000553693 FRRS1Q6ZNA5 592 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 KBTBD6Q86V97 674 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 C17orf53Q8N3J3 647 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-210ENST00000553693 FBXL16Q8N461 479 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 C17orf47Q8NEP4 570 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 SLC45A3Q96JT2 553 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 SFXN2Q96NB2 322 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 AGAP4Q96P64 663 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 SEPHS2Q99611 448 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 OLFM1Q99784 485 aa3.26□□□□□ -1.89
SCFD1-210ENST00000553693 NPHP4O75161 1426 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-210ENST00000553693 TROQ12816 1431 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-210ENST00000553693 TNRQ92752 1358 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 STRCP1A6NGW2 1772 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 ABCC1P33527 1531 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 CDC42BPBQ9Y5S2 1711 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 MED14O60244 1454 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 LOC102723996A0A087X1L8 192 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 TMEM221A6NGB7 291 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 A8MU10 97 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 DDHD2O94830 711 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 TRUB2O95900 331 aaKnown RBP3.25□□□□□ -1.89
SCFD1-210ENST00000553693 PRKAR1AP10644 381 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 SAT1P21673 171 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 JAK1P23458 1154 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 PTPN3P26045 913 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 PIK3R1P27986 724 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 GCH1P30793 250 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 ALDH3A2P51648 485 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 STAT2P52630 851 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 GCNT1Q02742 428 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 NTRK2Q16620 822 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 PHKG1Q16816 387 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 HIGD2BQ4VC39 106 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 UGT3A1Q6NUS8 523 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 Q6ZR54 194 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 CATSPERDQ86XM0 798 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 POM121L12Q8N7R1 296 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 AQP11Q8NBQ7 271 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 LRRC15Q8TF66 581 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 APOBEC4Q8WW27 367 aaKnown RBP3.25□□□□□ -1.89
SCFD1-210ENST00000553693 SPACA9Q96E40 222 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-210ENST00000553693 SPDL1Q96EA4 605 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 FAM20AQ96MK3 541 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 MRPL1Q9BYD6 325 aaKnown RBP3.25□□□□□ -1.89
SCFD1-210ENST00000553693 BCCIPQ9P287 314 aaKnown RBP eCLIP3.25□□□□□ -1.89
SCFD1-210ENST00000553693 PTRH2Q9Y3E5 179 aaKnown RBP3.25□□□□□ -1.89
SCFD1-210ENST00000553693 WIPI2Q9Y4P8 454 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 SAMD9LQ8IVG5 1584 aa3.25□□□□□ -1.89
SCFD1-210ENST00000553693 POLR1AO95602 1720 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-210ENST00000553693 ITSN2Q9NZM3 1697 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 A2MP01023 1474 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 LOC105371242A0A075B767 164 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 ERAL1O75616 437 aaKnown RBP3.24□□□□□ -1.89
SCFD1-210ENST00000553693 KRT33AO76009 404 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 BCL10O95999 233 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 DNAH10OSP0CZ25 163 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 HSPB3Q12988 150 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms