RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 SETBP1Q9Y6X0 1596 aa5.65□□□□□ -1.5
PCNX1-205ENST00000553508 GLOD5A6NK44 160 aa5.65□□□□□ -1.5
PCNX1-205ENST00000553508 DARSP14868 501 aaKnown RBP5.65□□□□□ -1.5
PCNX1-205ENST00000553508 PFKFB1P16118 471 aa5.65□□□□□ -1.5
PCNX1-205ENST00000553508 LBX1P52954 281 aa5.65□□□□□ -1.5
PCNX1-205ENST00000553508 DRP2Q13474 957 aa5.65□□□□□ -1.5
PCNX1-205ENST00000553508 BAATQ14032 418 aaPredicted RBP5.65□□□□□ -1.5
PCNX1-205ENST00000553508 CBWD6Q4V339 395 aa5.65□□□□□ -1.5
PCNX1-205ENST00000553508 CBWD3Q5JTY5 395 aa5.65□□□□□ -1.5
PCNX1-205ENST00000553508 SPATA1Q5VX52 437 aa5.65□□□□□ -1.5
PCNX1-205ENST00000553508 BSPRYQ5W0U4 402 aa5.65□□□□□ -1.5
PCNX1-205ENST00000553508 C11orf63Q6NUN7 778 aa5.65□□□□□ -1.5
PCNX1-205ENST00000553508 FAAP20Q6NZ36 180 aa5.65□□□□□ -1.5
PCNX1-205ENST00000553508 IL27RAQ6UWB1 636 aa5.65□□□□□ -1.5
PCNX1-205ENST00000553508 TMEM207Q6UWW9 146 aa5.65□□□□□ -1.5
PCNX1-205ENST00000553508 OR10S1Q8NGN2 331 aa5.65□□□□□ -1.5
PCNX1-205ENST00000553508 OR13C3Q8NGS6 347 aa5.65□□□□□ -1.5
PCNX1-205ENST00000553508 VANGL1Q8TAA9 524 aaPredicted RBP5.65□□□□□ -1.5
PCNX1-205ENST00000553508 FGFBP2Q9BYJ0 223 aa5.65□□□□□ -1.5
PCNX1-205ENST00000553508 PPANQ9NQ55 473 aaKnown RBP5.65□□□□□ -1.5
PCNX1-205ENST00000553508 FAM207AQ9NSI2 230 aaPredicted RBP5.65□□□□□ -1.5
PCNX1-205ENST00000553508 CRNNQ9UBG3 495 aaPredicted RBP5.65□□□□□ -1.5
PCNX1-205ENST00000553508 STUB1Q9UNE7 303 aa5.65□□□□□ -1.5
PCNX1-205ENST00000553508 PPP2R2CQ9Y2T4 447 aa5.65□□□□□ -1.5
PCNX1-205ENST00000553508 MAGEC1O60732 1142 aa5.64□□□□□ -1.51
PCNX1-205ENST00000553508 NXPH2O95156 264 aa5.64□□□□□ -1.51
PCNX1-205ENST00000553508 HNRNPKP61978 463 aaKnown RBP eCLIP5.64□□□□□ -1.51
PCNX1-205ENST00000553508 CA9Q16790 459 aa5.64□□□□□ -1.51
PCNX1-205ENST00000553508 BMP2KLQ5H9B9 411 aa5.64□□□□□ -1.51
PCNX1-205ENST00000553508 BTN2A1Q7KYR7 527 aa5.64□□□□□ -1.51
PCNX1-205ENST00000553508 GPRC5AQ8NFJ5 357 aa5.64□□□□□ -1.51
PCNX1-205ENST00000553508 SEPHS2Q99611 448 aa5.64□□□□□ -1.51
PCNX1-205ENST00000553508 MRPL1Q9BYD6 325 aaKnown RBP5.64□□□□□ -1.51
PCNX1-205ENST00000553508 PITPNM3Q9BZ71 974 aa5.64□□□□□ -1.51
PCNX1-205ENST00000553508 NSMCE4AQ9NXX6 385 aa5.64□□□□□ -1.51
PCNX1-205ENST00000553508 ERAP1Q9NZ08 941 aa5.64□□□□□ -1.51
PCNX1-205ENST00000553508 GDE1Q9NZC3 331 aa5.64□□□□□ -1.51
PCNX1-205ENST00000553508 PPP1R3CQ9UQK1 317 aa5.64□□□□□ -1.51
PCNX1-205ENST00000553508 MAGED1Q9Y5V3 778 aaPredicted RBP5.64□□□□□ -1.51
PCNX1-205ENST00000553508 SNX8Q9Y5X2 465 aa5.64□□□□□ -1.51
PCNX1-205ENST00000553508 SETD1AO15047 1707 aaKnown RBP5.64□□□□□ -1.51
PCNX1-205ENST00000553508 XRN1Q8IZH2 1706 aaKnown RBP5.64□□□□□ -1.51
PCNX1-205ENST00000553508 ADGRL3Q9HAR2 1447 aa5.64□□□□□ -1.51
PCNX1-205ENST00000553508 ASXL1Q8IXJ9 1541 aa5.64□□□□□ -1.51
PCNX1-205ENST00000553508 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.63□□□□□ -1.51
PCNX1-205ENST00000553508 PGM3O95394 542 aa5.63□□□□□ -1.51
PCNX1-205ENST00000553508 MPZP25189 248 aa5.63□□□□□ -1.51
PCNX1-205ENST00000553508 OPRL1P41146 370 aa5.63□□□□□ -1.51
PCNX1-205ENST00000553508 LMAN1P49257 510 aa5.63□□□□□ -1.51
PCNX1-205ENST00000553508 ZNF75DP51815 510 aa5.63□□□□□ -1.51
PCNX1-205ENST00000553508 MAPK12P53778 367 aa5.63□□□□□ -1.51
PCNX1-205ENST00000553508 PAX9P55771 341 aa5.63□□□□□ -1.51
PCNX1-205ENST00000553508 HSPB3Q12988 150 aa5.63□□□□□ -1.51
PCNX1-205ENST00000553508 HLA-BQ31612 363 aa5.63□□□□□ -1.51
PCNX1-205ENST00000553508 ZNF613Q6PF04 617 aa5.63□□□□□ -1.51
PCNX1-205ENST00000553508 TRIM65Q6PJ69 517 aa5.63□□□□□ -1.51
PCNX1-205ENST00000553508 BRINP3Q76B58 766 aa5.63□□□□□ -1.51
PCNX1-205ENST00000553508 NUDT13Q86X67 352 aa5.63□□□□□ -1.51
PCNX1-205ENST00000553508 SYT2Q8N9I0 419 aaPredicted RBP5.63□□□□□ -1.51
PCNX1-205ENST00000553508 THAP8Q8NA92 274 aa5.63□□□□□ -1.51
PCNX1-205ENST00000553508 SMAP2Q8WU79 429 aaPredicted RBP5.63□□□□□ -1.51
PCNX1-205ENST00000553508 FAM20AQ96MK3 541 aa5.63□□□□□ -1.51
PCNX1-205ENST00000553508 NECTIN4Q96NY8 510 aa5.63□□□□□ -1.51
PCNX1-205ENST00000553508 CCDC106Q9BWC9 280 aa5.63□□□□□ -1.51
PCNX1-205ENST00000553508 HAO2Q9NYQ3 351 aa5.63□□□□□ -1.51
PCNX1-205ENST00000553508 OR6C2Q9NZP2 312 aa5.63□□□□□ -1.51
PCNX1-205ENST00000553508 CDK12Q9NYV4 1490 aaPredicted RBP5.63□□□□□ -1.51
PCNX1-205ENST00000553508 C2orf81A6NN90 581 aa5.62□□□□□ -1.51
PCNX1-205ENST00000553508 DANCRP0C864 163 aa5.62□□□□□ -1.51
PCNX1-205ENST00000553508 MMP12P39900 470 aa5.62□□□□□ -1.51
PCNX1-205ENST00000553508 LIG4P49917 911 aa5.62□□□□□ -1.51
PCNX1-205ENST00000553508 GSDMDP57764 484 aa5.62□□□□□ -1.51
PCNX1-205ENST00000553508 UBXN2AP68543 259 aa5.62□□□□□ -1.51
PCNX1-205ENST00000553508 MAT1AQ00266 395 aaKnown RBP5.62□□□□□ -1.51
PCNX1-205ENST00000553508 ENPP2Q13822 863 aa5.62□□□□□ -1.51
PCNX1-205ENST00000553508 FASTKD1Q53R41 847 aaKnown RBP5.62□□□□□ -1.51
PCNX1-205ENST00000553508 LCN1P1Q5VSP4 162 aa5.62□□□□□ -1.51
PCNX1-205ENST00000553508 DOK6Q6PKX4 331 aa5.62□□□□□ -1.51
PCNX1-205ENST00000553508 TEKT4Q8WW24 435 aa5.62□□□□□ -1.51
PCNX1-205ENST00000553508 SECISBP2LQ93073 1101 aaKnown RBP5.62□□□□□ -1.51
PCNX1-205ENST00000553508 CENPTQ96BT3 561 aa5.62□□□□□ -1.51
PCNX1-205ENST00000553508 ZNF830Q96NB3 372 aaPredicted RBP5.62□□□□□ -1.51
PCNX1-205ENST00000553508 MYNNQ9NPC7 610 aa5.62□□□□□ -1.51
PCNX1-205ENST00000553508 PANK4Q9NVE7 773 aa5.62□□□□□ -1.51
PCNX1-205ENST00000553508 SLC24A2Q9UI40 661 aa5.62□□□□□ -1.51
PCNX1-205ENST00000553508 PTCH1Q13635 1447 aa5.62□□□□□ -1.51
PCNX1-205ENST00000553508 SETD5Q9C0A6 1442 aa5.62□□□□□ -1.51
PCNX1-205ENST00000553508 LRP6O75581 1613 aa5.62□□□□□ -1.51
PCNX1-205ENST00000553508 KIF1BO60333 1816 aa5.62□□□□□ -1.51
PCNX1-205ENST00000553508 hCG_1809904A0A1W2PP81 198 aa5.61□□□□□ -1.51
PCNX1-205ENST00000553508 A0A1W2PPE2 198 aa5.61□□□□□ -1.51
PCNX1-205ENST00000553508 A0A1W2PR64 198 aa5.61□□□□□ -1.51
PCNX1-205ENST00000553508 EPHB6O15197 1021 aa5.61□□□□□ -1.51
PCNX1-205ENST00000553508 ADAM20O43506 726 aa5.61□□□□□ -1.51
PCNX1-205ENST00000553508 HAPLN1P10915 354 aaPredicted RBP5.61□□□□□ -1.51
PCNX1-205ENST00000553508 CSTF2P33240 577 aaKnown RBP eCLIP5.61□□□□□ -1.51
PCNX1-205ENST00000553508 CCR10P46092 362 aa5.61□□□□□ -1.51
PCNX1-205ENST00000553508 LEPRP48357 1165 aaKnown RBP5.61□□□□□ -1.51
PCNX1-205ENST00000553508 NECTIN1Q15223 517 aa5.61□□□□□ -1.51
PCNX1-205ENST00000553508 UGT3A2Q3SY77 523 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms