RNA–Protein interactions for RNA: ENST00000553410.1

AC107958.3-201, humanhuman

TSL 3 BASIC

Gene AC107958.3, Length 431 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC107958.3-201ENST00000553410 LRCOL1A6NCL2 159 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 PANO1I0J062 215 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 TLX2O43763 284 aaPredicted RBP0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 ZNF253O75346 499 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 MTRF1O75570 445 aaKnown RBP0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 ZNF44P15621 663 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 TMEM11P17152 192 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 PMELP40967 661 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 CCR5P51681 352 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 GALCP54803 685 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 TRIM29Q14134 588 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 MELKQ14680 651 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 NR1D2Q14995 579 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 PCGF3Q3KNV8 242 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 FAM69AQ5T7M9 428 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 KRT39Q6A163 491 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 C5orf24Q7Z6I8 188 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 ARHGAP24Q8N264 748 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 PAPD5Q8NDF8 572 aaKnown RBP0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 MOSPD2Q8NHP6 518 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 SLCO4A1Q96BD0 722 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 INTS12Q96CB8 462 aaKnown RBP0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 NR1H4Q96RI1 486 aaPredicted RBP0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 TAAR6Q96RI8 345 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 PAXXQ9BUH6 204 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 SLC25A39Q9BZJ4 359 aaPredicted RBP0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 SCPEP1Q9HB40 452 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 GKN1Q9NS71 199 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 PKD2L2Q9NZM6 624 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 R4GN57 208 aa0.69□□□□□ -2.3
AC107958.3-201ENST00000553410 TRGV8A0A0C4DH27 118 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 O00370 1275 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 FPGTO14772 594 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 TGFB1I1O43294 461 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 ZNF861PO60384 105 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 SRPX2O60687 465 aaPredicted RBP0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 GP1BBP13224 206 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 AADACP22760 399 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 HTR3AP46098 478 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 RPL7AP62424 266 aaKnown RBP0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 PRKCEQ02156 737 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 ZNF33BQ06732 778 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 CYLC2Q14093 348 aaPredicted RBP0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 KIAA0040Q15053 153 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 EXT1Q16394 746 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 PRICKLE4Q2TBC4 344 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 SPDYCQ5MJ68 293 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 RARS2Q5T160 578 aaKnown RBP0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 KPRPQ5T749 579 aaPredicted RBP0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 CGB2Q6NT52 195 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 ZNF544Q6NX49 715 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 ARID3BQ8IVW6 561 aaPredicted RBP0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 OR5M8Q8NGP6 311 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 ZNF564Q8TBZ8 553 aaPredicted RBP0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 ERLEC1Q96DZ1 483 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 IMMP1LQ96LU5 166 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 OR6C1Q96RD1 312 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 CDX2Q99626 313 aaPredicted RBP0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 ZNF184Q99676 751 aaPredicted RBP0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 FNDC11Q9BVV2 318 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 RIC8AQ9NPQ8 531 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 RRP7BPQ9NSQ0 103 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 OSER1Q9NX31 292 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 B3GAT1Q9P2W7 334 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 MRPL11Q9Y3B7 192 aaKnown RBP0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 PCDHGA5Q9Y5G8 931 aa0.68□□□□□ -2.3
AC107958.3-201ENST00000553410 ITGB4P16144 1822 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 A0A1W2PQF6 199 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 EPOPA6NHQ4 379 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 F8VVB4 439 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 F8VWA3 439 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 SCAMP1O15126 338 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 PRKAR2BP31323 418 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 IST1P53990 364 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 TPD52P55327 224 aaPredicted RBP0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 CEBPZQ03701 1054 aaKnown RBP0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 LMOD3Q0VAK6 560 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 KRT33BQ14525 404 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 BAK1Q16611 211 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 ZSCAN23Q3MJ62 389 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 ALDH1L2Q3SY69 923 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 ZSCAN25Q6NSZ9 544 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 RPAINQ86UA6 219 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 TMEM116Q8NCL8 245 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 OR6T1Q8NGN1 323 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 RANBP9Q96S59 729 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 C16orf70Q9BSU1 422 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 SP140LQ9H930 580 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 CHMP1AQ9HD42 196 aaPredicted RBP0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 GEMIN8Q9NWZ8 242 aaKnown RBP0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 DHRS4-AS1Q9P1J3 65 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 POLLQ9UGP5 575 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 NENFQ9UMX5 172 aa0.67□□□□□ -2.3
AC107958.3-201ENST00000553410 PCDH11YQ9BZA8 1340 aa0.66□□□□□ -2.3
AC107958.3-201ENST00000553410 TRAV9-2A0A087WT02 112 aa0.66□□□□□ -2.3
AC107958.3-201ENST00000553410 TRBV4-1A0A0J9YWV2 114 aa0.66□□□□□ -2.3
AC107958.3-201ENST00000553410 ZSCAN5CA6NGD5 496 aaPredicted RBP0.66□□□□□ -2.3
AC107958.3-201ENST00000553410 ZNF749O43361 778 aa0.66□□□□□ -2.3
AC107958.3-201ENST00000553410 RHBDL1O75783 438 aa0.66□□□□□ -2.3
AC107958.3-201ENST00000553410 IGLV3-19P01714 112 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms