RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 CLSTN3Q9BQT9 956 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 THUMPD3Q9BV44 507 aaKnown RBP7.15□□□□□ -1.26
BEST3-212ENST00000553096 POLR1EQ9GZS1 481 aaKnown RBP7.15□□□□□ -1.26
BEST3-212ENST00000553096 CRISPLD2Q9H0B8 497 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 SIAEQ9HAT2 523 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 SDHAF3Q9NRP4 125 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 DCAF13Q9NV06 445 aaKnown RBP7.15□□□□□ -1.26
BEST3-212ENST00000553096 CD274Q9NZQ7 290 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 PCOLCE2Q9UKZ9 415 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 LRFN2Q9ULH4 789 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 PCDHGA10Q9Y5H3 936 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 ARL5AQ9Y689 179 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 ZFP37Q9Y6Q3 630 aaPredicted RBP7.15□□□□□ -1.26
BEST3-212ENST00000553096 CDH23Q9H251 3354 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 ILVBLA1L0T0 632 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 NPEPPSL1A6NEC2 478 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 LINC01387J3KSC0 135 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 PRMT5O14744 637 aaPredicted RBP7.15□□□□□ -1.27
BEST3-212ENST00000553096 RFPL2O75678 378 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 OR4F21O95013 312 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 IL6P05231 212 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 SELLP14151 372 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 OR1D2P34982 312 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 ATN1P54259 1190 aaPredicted RBP7.15□□□□□ -1.27
BEST3-212ENST00000553096 DEFA1P59665 94 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 DEFA3P59666 94 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 VBP1P61758 197 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 RPS24P62847 133 aaKnown RBP7.15□□□□□ -1.27
BEST3-212ENST00000553096 ZNF45Q02386 682 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 TRAF3Q13114 568 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 PARP15Q460N3 678 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 ZNF404Q494X3 552 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 ALG1LQ6GMV1 187 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 RNF165Q6ZSG1 346 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 Q6ZSR9 355 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 ANKS3Q6ZW76 656 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 PAGE2Q7Z2X7 111 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 DSG4Q86SJ6 1040 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 GLRX5Q86SX6 157 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 LYSMD2Q8IV50 215 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 PSMA8Q8TAA3 256 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 BLOC1S5Q8TDH9 187 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 NCLNQ969V3 563 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 LGALS12Q96DT0 336 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 VPS35Q96QK1 796 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 SEMA3CQ99985 751 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 SLIRPQ9GZT3 109 aaKnown RBP7.15□□□□□ -1.27
BEST3-212ENST00000553096 HOXD1Q9GZZ0 328 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 RNF38Q9H0F5 515 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 NPAP1Q9NZP6 1156 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 ERVK-18Q9QC07 812 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 TRMT6Q9UJA5 497 aaKnown RBP7.15□□□□□ -1.27
BEST3-212ENST00000553096 OGDHLQ9ULD0 1010 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 MTCL1Q9Y4B5 1905 aaKnown RBP7.15□□□□□ -1.27
BEST3-212ENST00000553096 CHD7Q9P2D1 2997 aa7.15□□□□□ -1.27
BEST3-212ENST00000553096 A0A1B0GTL3 188 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 C17orf113A0A1B0GUU1 675 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 C2orf78A6NCI8 922 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 ZNF840PA6NDX5 716 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 A6NL46 340 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 H7C4K7 107 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 ANKRD28O15084 1053 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 APBB3O95704 486 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 PIRTP0C851 137 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 G6PDP11413 515 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 POLR2CP19387 275 aaPredicted RBP7.14□□□□□ -1.27
BEST3-212ENST00000553096 PTGS2P35354 604 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 MAPKAPK2P49137 400 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 IST1P53990 364 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 IL2P60568 153 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 ACY1Q03154 408 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 VAC14Q08AM6 782 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 RAPSNQ13702 412 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 ZNF124Q15973 351 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 MAPKAPK3Q16644 382 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 TMEM236Q5W0B7 351 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 IL27RAQ6UWB1 636 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 MAMDC2Q7Z304 686 aaPredicted RBP7.14□□□□□ -1.27
BEST3-212ENST00000553096 B3GNT8Q7Z7M8 397 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 TMEM150AQ86TG1 271 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 JAZF1Q86VZ6 243 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 CCDC116Q8IYX3 515 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 ELMOD1Q8N336 334 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 AMER2Q8N7J2 671 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 CDYL2Q8N8U2 506 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 OR10A6Q8NH74 314 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 METTL6Q8TCB7 284 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 C2orf15Q8WU43 125 aaKnown RBP7.14□□□□□ -1.27
BEST3-212ENST00000553096 SGK3Q96BR1 496 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 ZNF486Q96H40 463 aaPredicted RBP7.14□□□□□ -1.27
BEST3-212ENST00000553096 ZBED2Q9BTP6 218 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 GKN1Q9NS71 199 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 NLE1Q9NVX2 485 aaPredicted RBP7.14□□□□□ -1.27
BEST3-212ENST00000553096 EMC3Q9P0I2 261 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 TMEFF2Q9UIK5 374 aaPredicted RBP7.14□□□□□ -1.27
BEST3-212ENST00000553096 ZNF225Q9UK10 706 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 INVSQ9Y283 1065 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 ZFC3H1O60293 1989 aaKnown RBP7.14□□□□□ -1.27
BEST3-212ENST00000553096 PCM1Q15154 2024 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 PNMA8CA0A1B0GUJ8 204 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms