RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 CCDC172P0C7W6 258 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 ITGAMP11215 1152 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 PYGMP11217 842 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 COX6A1P12074 109 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 MAGP20916 626 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 FDXRP22570 491 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 PDHA2P29803 388 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 GRIA3P42263 894 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 CARSP49589 748 aaKnown RBP5.11□□□□□ -1.59
HOXB3-213ENST00000552000 ST13P50502 369 aaKnown RBP5.11□□□□□ -1.59
HOXB3-213ENST00000552000 ARSEP51690 589 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 ARSFP54793 590 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 HSF1Q00613 529 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 ALDH6A1Q02252 535 aaKnown RBP5.11□□□□□ -1.59
HOXB3-213ENST00000552000 OCA2Q04671 838 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 PPIDQ08752 370 aaKnown RBP5.11□□□□□ -1.59
HOXB3-213ENST00000552000 AP1B1Q10567 949 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 OLIG2Q13516 323 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 BOP1Q14137 746 aaKnown RBP5.11□□□□□ -1.59
HOXB3-213ENST00000552000 PIGHQ14442 188 aaPredicted RBP5.11□□□□□ -1.59
HOXB3-213ENST00000552000 PTPRCAPQ14761 206 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 KRTCAP3Q53RY4 240 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 ZNF766Q5HY98 468 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 CCDC181Q5TID7 509 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 ABHD17BQ5VST6 288 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 ZDHHC20Q5W0Z9 365 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 CES4AQ5XG92 561 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 ATG9BQ674R7 924 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 NEK10Q6ZWH5 1172 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 NLRP9Q7RTR0 991 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 GLT6D1Q7Z4J2 308 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 IRF2BP2Q7Z5L9 587 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 BIVMQ86UB2 503 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 DOLPP1Q86YN1 238 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 CPNE8Q86YQ8 564 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 MCATQ8IVS2 390 aaKnown RBP5.11□□□□□ -1.59
HOXB3-213ENST00000552000 SLC25A41Q8N5S1 370 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 PQLC3Q8N755 202 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 OR5AR1Q8NGP9 310 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 SPATA3Q8NHX4 192 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 FLVCR1-AS1Q8TAF5 88 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 FAM71BQ8TC56 605 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 STT3BQ8TCJ2 826 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 ZNF398Q8TD17 642 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 DTX3LQ8TDB6 740 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 BLOC1S5Q8TDH9 187 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 THAP3Q8WTV1 239 aaPredicted RBP5.11□□□□□ -1.59
HOXB3-213ENST00000552000 PHF10Q8WUB8 498 aaKnown RBP5.11□□□□□ -1.59
HOXB3-213ENST00000552000 TADA1Q96BN2 335 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 DCUN1D1Q96GG9 259 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 LINC00615Q96LM1 132 aaPredicted RBP5.11□□□□□ -1.59
HOXB3-213ENST00000552000 ZNF830Q96NB3 372 aaPredicted RBP5.11□□□□□ -1.59
HOXB3-213ENST00000552000 SRPK1Q96SB4 655 aaKnown RBP5.11□□□□□ -1.59
HOXB3-213ENST00000552000 DMRTA2Q96SC8 542 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 VKORC1Q9BQB6 163 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 HES7Q9BYE0 225 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 UCK2Q9BZX2 261 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 RNF32Q9H0A6 362 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 OR52A5Q9H2C5 316 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 LIME1Q9H400 295 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 TRABDQ9H4I3 376 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 COG4Q9H9E3 785 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 GLOD4Q9HC38 313 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 MRPL47Q9HD33 250 aaKnown RBP5.11□□□□□ -1.59
HOXB3-213ENST00000552000 SMOXQ9NWM0 555 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 COQ3Q9NZJ6 369 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 VTI1BQ9UEU0 232 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 PLAGL1Q9UM63 463 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 PLEKHA6Q9Y2H5 1048 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 CHD3Q12873 2000 aaKnown RBP5.11□□□□□ -1.59
HOXB3-213ENST00000552000 NINQ8N4C6 2090 aa5.11□□□□□ -1.59
HOXB3-213ENST00000552000 LGALS16A8MUM7 142 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 ISM1B1AKI9 464 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 DDX3XO00571 662 aaKnown RBP eCLIP5.1□□□□□ -1.59
HOXB3-213ENST00000552000 PRRG2O14669 202 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 STX7O15400 261 aaKnown RBP5.1□□□□□ -1.59
HOXB3-213ENST00000552000 NDUFB5O43674 189 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 MLYCDO95822 493 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 TSPAN12O95859 305 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 TGP01266 2768 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 ZGLP1P0C6A0 271 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 MYBL2P10244 700 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 GZMAP12544 262 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 DNASE1P24855 282 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 CXCR2P25025 360 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 PEBP1P30086 187 aaKnown RBP5.1□□□□□ -1.59
HOXB3-213ENST00000552000 SHMT2P34897 504 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 NOTCH1P46531 2555 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 PRLHRP49683 370 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 MEOX1P50221 254 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 RAB28P51157 221 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 WNT3AP56704 352 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 ADAM8P78325 824 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 UBXN1Q04323 297 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 ZNF33BQ06732 778 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 TFF3Q07654 80 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 PCOLCEQ15113 449 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 SLC14A2Q15849 920 aa5.1□□□□□ -1.59
HOXB3-213ENST00000552000 HADHQ16836 314 aaKnown RBP5.1□□□□□ -1.59
HOXB3-213ENST00000552000 SIRPB2Q5JXA9 342 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms