RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 CATSPEREQ5SY80 951 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 ZYG11AQ6WRX3 759 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 RAB11FIP2Q7L804 512 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 KMT5CQ86Y97 462 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 C19orf47Q8N9M1 422 aaKnown RBP12.53□□□□□ -0.4
RAB5C-206ENST00000550406 AGBL5Q8NDL9 886 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 ARMC2Q8NEN0 867 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 OR4K1Q8NGD4 311 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 NEIL2Q969S2 332 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 PMEPA1Q969W9 287 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 ZUFSPQ96AP4 578 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 PRAP1Q96NZ9 151 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 FAM111AQ96PZ2 611 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 RUFY1Q96T51 708 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 PLCD4Q9BRC7 762 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 SCNM1Q9BWG6 230 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 C1QTNF3Q9BXJ4 246 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 STRADBQ9C0K7 418 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 CHRNA10Q9GZZ6 450 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 SPNS1Q9H2V7 528 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 DNAJC11Q9NVH1 559 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 TMCO1Q9UM00 188 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 SATB2Q9UPW6 733 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 LOXL2Q9Y4K0 774 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 K7EPI3 171 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 E2F3O00716 465 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 RPS17P08708 135 aaKnown RBP12.52□□□□□ -0.41
RAB5C-206ENST00000550406 EEF1DP29692 281 aaKnown RBP12.52□□□□□ -0.41
RAB5C-206ENST00000550406 CSTF2P33240 577 aaKnown RBP eCLIP12.52□□□□□ -0.41
RAB5C-206ENST00000550406 PRKAA2P54646 552 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 MAGOHP61326 146 aaKnown RBP12.52□□□□□ -0.41
RAB5C-206ENST00000550406 CSNK1G2P78368 415 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 ABATP80404 500 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 NFKB2Q00653 900 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 MC2RQ01718 297 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 CDC16Q13042 620 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 PCLAFQ15004 111 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 GPR19Q15760 415 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 DEFB110Q30KQ9 67 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 UNC50Q53HI1 259 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 SLCO4C1Q6ZQN7 724 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 C17orf64Q86WR6 236 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 FAM129CQ86XR2 697 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 ABHD11Q8NFV4 315 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 WDR36Q8NI36 951 aaKnown RBP12.52□□□□□ -0.41
RAB5C-206ENST00000550406 SLC5A11Q8WWX8 675 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 NSUN5Q96P11 429 aaKnown RBP12.52□□□□□ -0.41
RAB5C-206ENST00000550406 FCRL4Q96PJ5 515 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 HAUS8Q9BT25 410 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 CNOT10Q9H9A5 744 aaKnown RBP12.52□□□□□ -0.41
RAB5C-206ENST00000550406 ZBTB26Q9HCK0 441 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 APMAPQ9HDC9 416 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 PDE7BQ9NP56 450 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 TMEM184CQ9NVA4 438 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 COPG2Q9UBF2 871 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 PCTPQ9UKL6 214 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 SPTBN2O15020 2390 aa12.52□□□□□ -0.41
RAB5C-206ENST00000550406 MED19A0JLT2 244 aaPredicted RBP12.51□□□□□ -0.41
RAB5C-206ENST00000550406 B4E171 279 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 E7EQ34 232 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 H3BMH7 237 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 PPP6CO00743 305 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 OR7A17O14581 309 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 HAT1O14929 419 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 PLD2O14939 933 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 PRPF4O43172 522 aaKnown RBP eCLIP12.51□□□□□ -0.41
RAB5C-206ENST00000550406 LCMT2O60294 686 aaKnown RBP12.51□□□□□ -0.41
RAB5C-206ENST00000550406 CCNDBP1O95273 360 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 MYL2P10916 166 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 CPA3P15088 417 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 TAC1P20366 129 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 IMPDH1P20839 514 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 VARSP26640 1264 aaKnown RBP12.51□□□□□ -0.41
RAB5C-206ENST00000550406 TSPAN7P41732 249 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 MEF2AQ02078 507 aaPredicted RBP12.51□□□□□ -0.41
RAB5C-206ENST00000550406 PCDH1Q08174 1060 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 E2F2Q14209 437 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 C3orf38Q5JPI3 329 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 ZNF678Q5SXM1 525 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 FAM219BQ5XKK7 198 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 NXPE4Q6UWF7 544 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 LRRC70Q7Z2Q7 622 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 GOLGA7Q7Z5G4 137 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 PLD3Q8IV08 490 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 TEX9Q8N6V9 391 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 SNX31Q8N9S9 440 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 ZNF740Q8NDX6 193 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 RDH11Q8TC12 318 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 ZNF483Q8TF39 744 aaPredicted RBP12.51□□□□□ -0.41
RAB5C-206ENST00000550406 ZNF501Q96CX3 271 aaPredicted RBP12.51□□□□□ -0.41
RAB5C-206ENST00000550406 TCTN2Q96GX1 697 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 ATP6V1G3Q96LB4 118 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 TMEM237Q96Q45 408 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 CMKLR1Q99788 373 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 FBXO8Q9NRD0 319 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 OXSMQ9NWU1 459 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 GPRC5BQ9NZH0 403 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 ANKMY1Q9P2S6 941 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 OPTCQ9UBM4 332 aa12.51□□□□□ -0.41
RAB5C-206ENST00000550406 SNX7Q9UNH6 387 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms