RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 IFNB1P01574 187 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 TTPAP49638 278 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 EFNA3P52797 238 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 ARF3P61204 181 aaPredicted RBP11.97□□□□□ -0.49
LETMD1-222ENST00000550274 CRADDP78560 199 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 NAA30Q147X3 362 aaPredicted RBP11.97□□□□□ -0.49
LETMD1-222ENST00000550274 MUM1Q2TAK8 710 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 AARS2Q5JTZ9 985 aaKnown RBP11.97□□□□□ -0.49
LETMD1-222ENST00000550274 CTSL3PQ5NE16 218 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 FAAH2Q6GMR7 532 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 FBXO42Q6P3S6 717 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 TTC23LQ6PF05 361 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 NDUFAF7Q7L592 441 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 OTOAQ7RTW8 1153 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 PPHLN1Q8NEY8 458 aaKnown RBP11.97□□□□□ -0.49
LETMD1-222ENST00000550274 GSDMBQ8TAX9 411 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 HAS2Q92819 552 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 PEX13Q92968 403 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 CABS1Q96KC9 395 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 PANX3Q96QZ0 392 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 ZFYVE21Q9BQ24 234 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 DPH7Q9BTV6 452 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 ACAT2Q9BWD1 397 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 CHRAC1Q9NRG0 131 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 RAB6BQ9NRW1 208 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 TRPC4Q9UBN4 977 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 GNPTGQ9UJJ9 305 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 ANAPC5Q9UJX4 755 aa11.97□□□□□ -0.49
LETMD1-222ENST00000550274 MRPS2Q9Y399 296 aaKnown RBP11.97□□□□□ -0.49
LETMD1-222ENST00000550274 TRAV17A0A0B4J275 112 aa11.96□□□□□ -0.49
LETMD1-222ENST00000550274 IGKV1-8A0A0C4DH67 115 aa11.96□□□□□ -0.49
LETMD1-222ENST00000550274 SERPINA7P05543 415 aa11.96□□□□□ -0.49
LETMD1-222ENST00000550274 APRTP07741 180 aa11.96□□□□□ -0.49
LETMD1-222ENST00000550274 ERVK-10P10266 1014 aa11.96□□□□□ -0.49
LETMD1-222ENST00000550274 MST1P26927 711 aa11.96□□□□□ -0.49
LETMD1-222ENST00000550274 STIP1P31948 543 aaKnown RBP11.96□□□□□ -0.49
LETMD1-222ENST00000550274 EMP2P54851 167 aa11.96□□□□□ -0.49
LETMD1-222ENST00000550274 EIF3BP55884 814 aaKnown RBP11.96□□□□□ -0.49
LETMD1-222ENST00000550274 INAQ16352 499 aa11.96□□□□□ -0.49
LETMD1-222ENST00000550274 HKDC1Q2TB90 917 aa11.96□□□□□ -0.49
LETMD1-222ENST00000550274 SKOR2Q2VWA4 1001 aaPredicted RBP11.96□□□□□ -0.49
LETMD1-222ENST00000550274 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.96□□□□□ -0.49
LETMD1-222ENST00000550274 SUSD1Q6UWL2 747 aa11.96□□□□□ -0.49
LETMD1-222ENST00000550274 GFRALQ6UXV0 394 aa11.96□□□□□ -0.49
LETMD1-222ENST00000550274 KIAA1328Q86T90 577 aa11.96□□□□□ -0.49
LETMD1-222ENST00000550274 RAB42Q8N4Z0 105 aa11.96□□□□□ -0.49
LETMD1-222ENST00000550274 AMER3Q8N944 861 aa11.96□□□□□ -0.49
LETMD1-222ENST00000550274 C1orf54Q8WWF1 131 aa11.96□□□□□ -0.49
LETMD1-222ENST00000550274 FAM136AQ96C01 138 aa11.96□□□□□ -0.49
LETMD1-222ENST00000550274 CCDC120Q96HB5 630 aa11.96□□□□□ -0.49
LETMD1-222ENST00000550274 HES6Q96HZ4 224 aa11.96□□□□□ -0.49
LETMD1-222ENST00000550274 TREX1Q9NSU2 369 aa11.96□□□□□ -0.49
LETMD1-222ENST00000550274 SPATA7Q9P0W8 599 aa11.96□□□□□ -0.49
LETMD1-222ENST00000550274 RUVBL1Q9Y265 456 aaKnown RBP11.96□□□□□ -0.49
LETMD1-222ENST00000550274 KPNA5O15131 536 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 NIPSNAP2O75323 286 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 UNC5CO95185 931 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 BMP10O95393 424 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 MATN4O95460 622 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 WDPCPO95876 746 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 ZSCAN5DPP0CG00 497 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 ITGAMP11215 1152 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 ERGP11308 486 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 FDXRP22570 491 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 RPS3P23396 243 aaKnown RBP eCLIP11.95□□□□□ -0.5
LETMD1-222ENST00000550274 CXCR2P25025 360 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 NMBRP28336 390 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 CMPK1P30085 196 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 CCNFP41002 786 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 SESN2P58004 480 aaPredicted RBP11.95□□□□□ -0.5
LETMD1-222ENST00000550274 SNRPNP63162 240 aaKnown RBP11.95□□□□□ -0.5
LETMD1-222ENST00000550274 ART3Q13508 389 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 GBX1Q14549 363 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 PCOLCEQ15113 449 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 SYT16Q17RD7 645 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 PCID2Q5JVF3 399 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 HIBCHQ6NVY1 386 aaPredicted RBP11.95□□□□□ -0.5
LETMD1-222ENST00000550274 PAQR7Q86WK9 346 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 SYCE1Q8N0S2 351 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 ARHGEF39Q8N4T4 335 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 CSNK1A1LQ8N752 337 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 MOCOSQ96EN8 888 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 MRFAP1L1Q96HT8 127 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 BIRC8Q96P09 236 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 YIPF2Q9BWQ6 316 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.95□□□□□ -0.5
LETMD1-222ENST00000550274 RIC8BQ9NVN3 520 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 ZNF148Q9UQR1 794 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 MRFAP1Q9Y605 127 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 CAPN6Q9Y6Q1 641 aa11.95□□□□□ -0.5
LETMD1-222ENST00000550274 LOC102723996A0A087X1L8 192 aa11.94□□□□□ -0.5
LETMD1-222ENST00000550274 TRGV8A0A0C4DH27 118 aa11.94□□□□□ -0.5
LETMD1-222ENST00000550274 ARHGEF33A8MVX0 844 aa11.94□□□□□ -0.5
LETMD1-222ENST00000550274 P2RX6O15547 441 aa11.94□□□□□ -0.5
LETMD1-222ENST00000550274 FOXS1O43638 330 aa11.94□□□□□ -0.5
LETMD1-222ENST00000550274 NDUFS3O75489 264 aa11.94□□□□□ -0.5
LETMD1-222ENST00000550274 WISP2O76076 250 aa11.94□□□□□ -0.5
LETMD1-222ENST00000550274 HEXBP07686 556 aa11.94□□□□□ -0.5
LETMD1-222ENST00000550274 UQCRHP07919 91 aa11.94□□□□□ -0.5
LETMD1-222ENST00000550274 ARNTP27540 789 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms