RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 LKAAEAR1Q8TD35 194 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 TCTN2Q96GX1 697 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 VPS39Q96JC1 886 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 GPR22Q99680 433 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 AARSD1Q9BTE6 412 aaKnown RBP12.9□□□□□ -0.34
NUP188-211ENST00000550219 GPR83Q9NYM4 423 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 IFT80Q9P2H3 777 aaPredicted RBP12.9□□□□□ -0.34
NUP188-211ENST00000550219 TXNDC16Q9P2K2 825 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 POLG2Q9UHN1 485 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 CDYLQ9Y232 598 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 KLHL20Q9Y2M5 609 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 MED16Q9Y2X0 877 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 PTRH2Q9Y3E5 179 aaKnown RBP12.9□□□□□ -0.34
NUP188-211ENST00000550219 PCSK5Q92824 1860 aa12.9□□□□□ -0.34
NUP188-211ENST00000550219 H3BMM5 538 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 DYNC1I1O14576 645 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 KDM1AO60341 852 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 SORBS2O94875 1100 aaKnown RBP12.89□□□□□ -0.35
NUP188-211ENST00000550219 TPBGLP0DKB5 382 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 GP1BBP13224 206 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 PKLRP30613 574 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 FMO4P31512 558 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 FOLR3P41439 243 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 TIAL1Q01085 375 aaKnown RBP eCLIP12.89□□□□□ -0.35
NUP188-211ENST00000550219 ZNF844Q08AG5 666 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 HSPA14Q0VDF9 509 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 MED25Q71SY5 747 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 HDXQ7Z353 690 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 VRK3Q8IV63 474 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 RIBC1Q8N443 379 aaPredicted RBP12.89□□□□□ -0.35
NUP188-211ENST00000550219 TMEM102Q8N9M5 508 aaPredicted RBP12.89□□□□□ -0.35
NUP188-211ENST00000550219 LMNTD1Q8N9Z9 388 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 FLVCR1-AS1Q8TAF5 88 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 ZIM3Q96PE6 472 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 C17orf62Q9BQA9 187 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 DPH2Q9BQC3 489 aaPredicted RBP12.89□□□□□ -0.35
NUP188-211ENST00000550219 TSSK1BQ9BXA7 367 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 VIPAS39Q9H9C1 493 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 MLXIPLQ9NP71 852 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 SLAMF7Q9NQ25 335 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 OR6C2Q9NZP2 312 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 KLHL42Q9P2K6 505 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 PSMC3IPQ9P2W1 217 aaPredicted RBP12.89□□□□□ -0.35
NUP188-211ENST00000550219 GNPTGQ9UJJ9 305 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 AP1M2Q9Y6Q5 423 aa12.89□□□□□ -0.35
NUP188-211ENST00000550219 IQCF5A8MTL0 148 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 F8W8V4 182 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 MAP2K7O14733 419 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 RASGRF2O14827 1237 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 CDH16O75309 829 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 CEACAM4O75871 244 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 MAGP20916 626 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 CNTFP26441 200 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 CCR7P32248 378 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 GABRA4P48169 554 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 PLOD1Q02809 727 aaPredicted RBP12.88□□□□□ -0.35
NUP188-211ENST00000550219 IFFO1Q0D2I5 559 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 SLC5A12Q1EHB4 618 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 RBM20Q5T481 1227 aaKnown RBP12.88□□□□□ -0.35
NUP188-211ENST00000550219 FHL5Q5TD97 284 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 HECTD2Q5U5R9 776 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 SLC6A19Q695T7 634 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 FAM45BPQ6NSW5 357 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 RHBDD2Q6NTF9 364 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 JMJD6Q6NYC1 403 aaPredicted RBP12.88□□□□□ -0.35
NUP188-211ENST00000550219 KRT222Q8N1A0 295 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 GALNT11Q8NCW6 608 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 FAM45AQ8TCE6 357 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 EPS8L3Q8TE67 593 aaKnown RBP12.88□□□□□ -0.35
NUP188-211ENST00000550219 KCNJ9Q92806 393 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 ISL2Q96A47 359 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 MRRFQ96E11 262 aaKnown RBP12.88□□□□□ -0.35
NUP188-211ENST00000550219 IL17FQ96PD4 163 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 GBP5Q96PP8 586 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 NDC1Q9BTX1 674 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 LGALS13Q9UHV8 139 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 TSR3Q9UJK0 312 aaKnown RBP12.88□□□□□ -0.35
NUP188-211ENST00000550219 SRPK3Q9UPE1 567 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 MTO1Q9Y2Z2 717 aaKnown RBP12.88□□□□□ -0.35
NUP188-211ENST00000550219 VWA7Q9Y334 891 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 IKBKGQ9Y6K9 419 aa12.88□□□□□ -0.35
NUP188-211ENST00000550219 DOPEY2Q9Y3R5 2298 aa12.87□□□□□ -0.35
NUP188-211ENST00000550219 FAM95CA0A1B0GW59 222 aa12.87□□□□□ -0.35
NUP188-211ENST00000550219 MASP2O00187 686 aa12.87□□□□□ -0.35
NUP188-211ENST00000550219 PEX12O00623 359 aa12.87□□□□□ -0.35
NUP188-211ENST00000550219 KRT38O76015 456 aa12.87□□□□□ -0.35
NUP188-211ENST00000550219 WISP3O95389 354 aaPredicted RBP12.87□□□□□ -0.35
NUP188-211ENST00000550219 SNRPAP09012 282 aaKnown RBP12.87□□□□□ -0.35
NUP188-211ENST00000550219 FDXRP22570 491 aa12.87□□□□□ -0.35
NUP188-211ENST00000550219 RAB28P51157 221 aa12.87□□□□□ -0.35
NUP188-211ENST00000550219 CDKN2DP55273 166 aa12.87□□□□□ -0.35
NUP188-211ENST00000550219 TAS2R39P59534 338 aa12.87□□□□□ -0.35
NUP188-211ENST00000550219 DCDP81605 110 aaKnown RBP12.87□□□□□ -0.35
NUP188-211ENST00000550219 POU4F1Q01851 419 aa12.87□□□□□ -0.35
NUP188-211ENST00000550219 KIR2DS3Q14952 304 aa12.87□□□□□ -0.35
NUP188-211ENST00000550219 TMED2Q15363 201 aa12.87□□□□□ -0.35
NUP188-211ENST00000550219 INPP5JQ15735 1006 aaPredicted RBP12.87□□□□□ -0.35
NUP188-211ENST00000550219 ZKSCAN8Q15776 578 aaPredicted RBP12.87□□□□□ -0.35
NUP188-211ENST00000550219 LGSNQ5TDP6 509 aa12.87□□□□□ -0.35
NUP188-211ENST00000550219 PTRHD1Q6GMV3 140 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms