RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 CDC23Q9UJX2 597 aa18.65■□□□□ 0.58
ATF1-202ENST00000549612 FBXL4Q9UKA2 621 aa18.65■□□□□ 0.58
ATF1-202ENST00000549612 PCM1Q15154 2024 aa18.64■□□□□ 0.58
ATF1-202ENST00000549612 USP9YO00507 2555 aaPredicted RBP18.64■□□□□ 0.57
ATF1-202ENST00000549612 H0YGG7 62 aa18.64■□□□□ 0.57
ATF1-202ENST00000549612 SOCS6O14544 535 aa18.64■□□□□ 0.57
ATF1-202ENST00000549612 VPS26AO75436 327 aa18.64■□□□□ 0.57
ATF1-202ENST00000549612 CCNDBP1O95273 360 aa18.64■□□□□ 0.57
ATF1-202ENST00000549612 TCP1P17987 556 aaKnown RBP18.64■□□□□ 0.57
ATF1-202ENST00000549612 ARF3P61204 181 aaPredicted RBP18.64■□□□□ 0.57
ATF1-202ENST00000549612 RELAQ04206 551 aa18.64■□□□□ 0.57
ATF1-202ENST00000549612 SRSF1Q07955 248 aaKnown RBP eCLIP18.64■□□□□ 0.57
ATF1-202ENST00000549612 MUM1Q2TAK8 710 aa18.64■□□□□ 0.57
ATF1-202ENST00000549612 SPNS2Q8IVW8 549 aa18.64■□□□□ 0.57
ATF1-202ENST00000549612 LRRC56Q8IYG6 542 aaPredicted RBP18.64■□□□□ 0.57
ATF1-202ENST00000549612 C2CD4AQ8NCU7 369 aaPredicted RBP18.64■□□□□ 0.57
ATF1-202ENST00000549612 MFRPQ9BY79 579 aa18.64■□□□□ 0.57
ATF1-202ENST00000549612 ZNF304Q9HCX3 659 aa18.64■□□□□ 0.57
ATF1-202ENST00000549612 IARS2Q9NSE4 1012 aaKnown RBP18.64■□□□□ 0.57
ATF1-202ENST00000549612 HS3ST3B1Q9Y662 390 aa18.64■□□□□ 0.57
ATF1-202ENST00000549612 MAU2Q9Y6X3 613 aa18.64■□□□□ 0.57
ATF1-202ENST00000549612 MASP2O00187 686 aa18.63■□□□□ 0.57
ATF1-202ENST00000549612 ZBTB14O43829 449 aa18.63■□□□□ 0.57
ATF1-202ENST00000549612 VPS4BO75351 444 aa18.63■□□□□ 0.57
ATF1-202ENST00000549612 IPO13O94829 963 aaKnown RBP18.63■□□□□ 0.57
ATF1-202ENST00000549612 TTC4O95801 387 aa18.63■□□□□ 0.57
ATF1-202ENST00000549612 EIF2S1P05198 315 aaKnown RBP18.63■□□□□ 0.57
ATF1-202ENST00000549612 ERVK-10P10266 1014 aa18.63■□□□□ 0.57
ATF1-202ENST00000549612 EZRP15311 586 aaKnown RBP18.63■□□□□ 0.57
ATF1-202ENST00000549612 ABATP80404 500 aa18.63■□□□□ 0.57
ATF1-202ENST00000549612 DHX9Q08211 1270 aaKnown RBP18.63■□□□□ 0.57
ATF1-202ENST00000549612 AIMP2Q13155 320 aaKnown RBP18.63■□□□□ 0.57
ATF1-202ENST00000549612 TSTA3Q13630 321 aaPredicted RBP18.63■□□□□ 0.57
ATF1-202ENST00000549612 INPP5JQ15735 1006 aaPredicted RBP18.63■□□□□ 0.57
ATF1-202ENST00000549612 PIWIL4Q7Z3Z4 852 aaKnown RBP18.63■□□□□ 0.57
ATF1-202ENST00000549612 PCGF5Q86SE9 256 aa18.63■□□□□ 0.57
ATF1-202ENST00000549612 CPNE9Q8IYJ1 553 aa18.63■□□□□ 0.57
ATF1-202ENST00000549612 FAM26EQ8N5C1 309 aa18.63■□□□□ 0.57
ATF1-202ENST00000549612 PPFIBP2Q8ND30 876 aa18.63■□□□□ 0.57
ATF1-202ENST00000549612 EBNA1BP2Q99848 306 aaKnown RBP18.63■□□□□ 0.57
ATF1-202ENST00000549612 NAT9Q9BTE0 207 aa18.63■□□□□ 0.57
ATF1-202ENST00000549612 SOX17Q9H6I2 414 aaPredicted RBP18.63■□□□□ 0.57
ATF1-202ENST00000549612 SYNPO2LQ9H987 977 aa18.63■□□□□ 0.57
ATF1-202ENST00000549612 SLAMF7Q9NQ25 335 aa18.63■□□□□ 0.57
ATF1-202ENST00000549612 SEMA3GQ9NS98 782 aa18.63■□□□□ 0.57
ATF1-202ENST00000549612 UTP6Q9NYH9 597 aaKnown RBP18.63■□□□□ 0.57
ATF1-202ENST00000549612 VPS4AQ9UN37 437 aa18.63■□□□□ 0.57
ATF1-202ENST00000549612 SMAPO00193 183 aa18.62■□□□□ 0.57
ATF1-202ENST00000549612 SYF2O95926 243 aaKnown RBP18.62■□□□□ 0.57
ATF1-202ENST00000549612 IVDP26440 423 aa18.62■□□□□ 0.57
ATF1-202ENST00000549612 UQCRFS1P47985 274 aa18.62■□□□□ 0.57
ATF1-202ENST00000549612 TIAL1Q01085 375 aaKnown RBP eCLIP18.62■□□□□ 0.57
ATF1-202ENST00000549612 MSS51Q4VC12 460 aa18.62■□□□□ 0.57
ATF1-202ENST00000549612 PRAMEF13Q5VWM6 474 aa18.62■□□□□ 0.57
ATF1-202ENST00000549612 LRRC8EQ6NSJ5 796 aa18.62■□□□□ 0.57
ATF1-202ENST00000549612 KIRREL2Q6UWL6 708 aa18.62■□□□□ 0.57
ATF1-202ENST00000549612 SHISA6Q6ZSJ9 500 aa18.62■□□□□ 0.57
ATF1-202ENST00000549612 CNTN4Q8IWV2 1026 aa18.62■□□□□ 0.57
ATF1-202ENST00000549612 CSNK1A1LQ8N752 337 aa18.62■□□□□ 0.57
ATF1-202ENST00000549612 GABPB2Q8TAK5 448 aaPredicted RBP18.62■□□□□ 0.57
ATF1-202ENST00000549612 COL26A1Q96A83 441 aa18.62■□□□□ 0.57
ATF1-202ENST00000549612 MVB12AQ96EY5 273 aa18.62■□□□□ 0.57
ATF1-202ENST00000549612 OR2A5Q96R48 311 aa18.62■□□□□ 0.57
ATF1-202ENST00000549612 LUZP4Q9P127 313 aa18.62■□□□□ 0.57
ATF1-202ENST00000549612 ZNF282Q9UDV7 671 aaPredicted RBP18.62■□□□□ 0.57
ATF1-202ENST00000549612 SHANK1Q9Y566 2161 aa18.61■□□□□ 0.57
ATF1-202ENST00000549612 NUP210LQ5VU65 1888 aa18.61■□□□□ 0.57
ATF1-202ENST00000549612 IGLV3-12A0A075B6K2 115 aa18.61■□□□□ 0.57
ATF1-202ENST00000549612 BANF1O75531 89 aa18.61■□□□□ 0.57
ATF1-202ENST00000549612 VARSP26640 1264 aaKnown RBP18.61■□□□□ 0.57
ATF1-202ENST00000549612 GABRB3P28472 473 aa18.61■□□□□ 0.57
ATF1-202ENST00000549612 IMPA1P29218 277 aa18.61■□□□□ 0.57
ATF1-202ENST00000549612 OCA2Q04671 838 aa18.61■□□□□ 0.57
ATF1-202ENST00000549612 KLC1Q07866 573 aa18.61■□□□□ 0.57
ATF1-202ENST00000549612 RBBP7Q16576 425 aa18.61■□□□□ 0.57
ATF1-202ENST00000549612 PRR30Q53SZ7 412 aaPredicted RBP18.61■□□□□ 0.57
ATF1-202ENST00000549612 SPANXN3Q5MJ09 141 aa18.61■□□□□ 0.57
ATF1-202ENST00000549612 GARNL3Q5VVW2 1013 aa18.61■□□□□ 0.57
ATF1-202ENST00000549612 UGT3A1Q6NUS8 523 aa18.61■□□□□ 0.57
ATF1-202ENST00000549612 KIAA0408Q6ZU52 694 aa18.61■□□□□ 0.57
ATF1-202ENST00000549612 UBE2R2Q712K3 238 aaPredicted RBP18.61■□□□□ 0.57
ATF1-202ENST00000549612 ARHGEF39Q8N4T4 335 aa18.61■□□□□ 0.57
ATF1-202ENST00000549612 STT3BQ8TCJ2 826 aa18.61■□□□□ 0.57
ATF1-202ENST00000549612 TM9SF4Q92544 642 aa18.61■□□□□ 0.57
ATF1-202ENST00000549612 CABS1Q96KC9 395 aa18.61■□□□□ 0.57
ATF1-202ENST00000549612 CRB3Q9BUF7 120 aa18.61■□□□□ 0.57
ATF1-202ENST00000549612 STOX2Q9P2F5 926 aaPredicted RBP18.61■□□□□ 0.57
ATF1-202ENST00000549612 TRMT6Q9UJA5 497 aaKnown RBP18.61■□□□□ 0.57
ATF1-202ENST00000549612 RUVBL1Q9Y265 456 aaKnown RBP18.61■□□□□ 0.57
ATF1-202ENST00000549612 B3GNT3Q9Y2A9 372 aa18.61■□□□□ 0.57
ATF1-202ENST00000549612 SPTAN1Q13813 2472 aaKnown RBP18.61■□□□□ 0.57
ATF1-202ENST00000549612 ZGLP1P0C6A0 271 aa18.6■□□□□ 0.57
ATF1-202ENST00000549612 FBLP22087 321 aaKnown RBP18.6■□□□□ 0.57
ATF1-202ENST00000549612 GNLYP22749 145 aa18.6■□□□□ 0.57
ATF1-202ENST00000549612 ITGA3P26006 1051 aa18.6■□□□□ 0.57
ATF1-202ENST00000549612 CARSP49589 748 aaKnown RBP18.6■□□□□ 0.57
ATF1-202ENST00000549612 DSG2Q14126 1118 aa18.6■□□□□ 0.57
ATF1-202ENST00000549612 HKDC1Q2TB90 917 aa18.6■□□□□ 0.57
ATF1-202ENST00000549612 TUBB8Q3ZCM7 444 aa18.6■□□□□ 0.57
ATF1-202ENST00000549612 PLEKHN1Q494U1 663 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms