RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 FKBP9O95302 570 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 EPORP19235 508 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 HERVK_113P63132 956 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 TARDBPQ13148 414 aaKnown RBP eCLIP20.37■□□□□ 0.85
VPS29-206ENST00000549578 CATSPEREQ5SY80 951 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 FCRL6Q6DN72 434 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 FIGLAQ6QHK4 219 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 ADCK2Q7Z695 626 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 SLC41A2Q96JW4 573 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 PRAP1Q96NZ9 151 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 NSUN5Q96P11 429 aaKnown RBP20.37■□□□□ 0.85
VPS29-206ENST00000549578 ERVK-6Q9BXR3 956 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 OXSMQ9NWU1 459 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 PCTPQ9UKL6 214 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 ANGPTL3Q9Y5C1 460 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 RPS17P08708 135 aaKnown RBP20.37■□□□□ 0.85
VPS29-206ENST00000549578 ALDH3A1P30838 453 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 ARL4DP49703 201 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 HSD11B2P80365 405 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 GTF2H2Q13888 395 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 KCNAB1Q14722 419 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 KIF26BQ2KJY2 2108 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 ZNF678Q5SXM1 525 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 GTF2H2CQ6P1K8 395 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 GOLGA7Q7Z5G4 137 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 TMPRSS11BQ86T26 416 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 CCDC126Q96EE4 140 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 STRADBQ9C0K7 418 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 FAM60AQ9NP50 221 aa20.37■□□□□ 0.85
VPS29-206ENST00000549578 HEATR5BQ9P2D3 2071 aa20.36■□□□□ 0.85
VPS29-206ENST00000549578 ADAMTS20P59510 1910 aa20.36■□□□□ 0.85
VPS29-206ENST00000549578 EPB42P16452 691 aa20.36■□□□□ 0.85
VPS29-206ENST00000549578 NELFEP18615 380 aaKnown RBP20.36■□□□□ 0.85
VPS29-206ENST00000549578 GNAZP19086 355 aa20.36■□□□□ 0.85
VPS29-206ENST00000549578 IMPDH1P20839 514 aa20.36■□□□□ 0.85
VPS29-206ENST00000549578 CSTF2P33240 577 aaKnown RBP eCLIP20.36■□□□□ 0.85
VPS29-206ENST00000549578 MLLT3P42568 568 aaPredicted RBP20.36■□□□□ 0.85
VPS29-206ENST00000549578 UNC50Q53HI1 259 aa20.36■□□□□ 0.85
VPS29-206ENST00000549578 ZNF425Q6IV72 752 aa20.36■□□□□ 0.85
VPS29-206ENST00000549578 METTL2BQ6P1Q9 378 aaKnown RBP20.36■□□□□ 0.85
VPS29-206ENST00000549578 TMPRSS7Q7RTY8 843 aa20.36■□□□□ 0.85
VPS29-206ENST00000549578 KMT5CQ86Y97 462 aa20.36■□□□□ 0.85
VPS29-206ENST00000549578 GALNT15Q8N3T1 639 aa20.36■□□□□ 0.85
VPS29-206ENST00000549578 MGARPQ8TDB4 240 aa20.36■□□□□ 0.85
VPS29-206ENST00000549578 ZUFSPQ96AP4 578 aa20.36■□□□□ 0.85
VPS29-206ENST00000549578 L3HYPDHQ96EM0 354 aa20.36■□□□□ 0.85
VPS29-206ENST00000549578 PLCD4Q9BRC7 762 aa20.36■□□□□ 0.85
VPS29-206ENST00000549578 C1QTNF3Q9BXJ4 246 aa20.36■□□□□ 0.85
VPS29-206ENST00000549578 GPRC5BQ9NZH0 403 aa20.36■□□□□ 0.85
VPS29-206ENST00000549578 BTRCQ9Y297 605 aa20.36■□□□□ 0.85
VPS29-206ENST00000549578 KLK4Q9Y5K2 254 aa20.36■□□□□ 0.85
VPS29-206ENST00000549578 KNTC1P50748 2209 aa20.36■□□□□ 0.85
VPS29-206ENST00000549578 OR2A25A4D2G3 310 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 TMX2-CTNND1H3BSU7 103 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 HGSO14964 777 aaPredicted RBP20.35■□□□□ 0.85
VPS29-206ENST00000549578 HYAL3O43820 417 aaPredicted RBP20.35■□□□□ 0.85
VPS29-206ENST00000549578 PRAMEF4O60810 478 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 SUPT7LO94864 414 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 BPGMP07738 259 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 EBLN1P0CF75 366 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 SERPINB4P48594 390 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 NAGLUP54802 743 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 CDH13P55290 713 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 SH3BP2P78314 561 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 MEF2AQ02078 507 aaPredicted RBP20.35■□□□□ 0.85
VPS29-206ENST00000549578 FOXC1Q12948 553 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 PRAMEF9Q5VWM5 478 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 LIPMQ5VYY2 423 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 DGLUCYQ7Z3D6 616 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 PAQR7Q86WK9 346 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 FAM129CQ86XR2 697 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 CACTIN-AS1Q8N1I8 211 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 D2HGDHQ8N465 521 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 CCNYL1Q8N7R7 359 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 AGBL5Q8NDL9 886 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 ABHD11Q8NFV4 315 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 ZNF483Q8TF39 744 aaPredicted RBP20.35■□□□□ 0.85
VPS29-206ENST00000549578 TCTN2Q96GX1 697 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 ZBTB26Q9HCK0 441 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 PDE7BQ9NP56 450 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 OCIAD1Q9NX40 245 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 SNX7Q9UNH6 387 aa20.35■□□□□ 0.85
VPS29-206ENST00000549578 WDR91A4D1P6 747 aa20.34■□□□□ 0.85
VPS29-206ENST00000549578 HAT1O14929 419 aa20.34■□□□□ 0.85
VPS29-206ENST00000549578 CLGNO14967 610 aa20.34■□□□□ 0.85
VPS29-206ENST00000549578 HCRTR1O43613 425 aa20.34■□□□□ 0.85
VPS29-206ENST00000549578 CTSVO60911 334 aa20.34■□□□□ 0.85
VPS29-206ENST00000549578 DHRS4L1P0CG22 281 aa20.34■□□□□ 0.85
VPS29-206ENST00000549578 HGFP14210 728 aa20.34■□□□□ 0.85
VPS29-206ENST00000549578 TSPAN8P19075 237 aa20.34■□□□□ 0.85
VPS29-206ENST00000549578 VARSP26640 1264 aaKnown RBP20.34■□□□□ 0.85
VPS29-206ENST00000549578 PIK3CGP48736 1102 aa20.34■□□□□ 0.85
VPS29-206ENST00000549578 CCR8P51685 355 aa20.34■□□□□ 0.85
VPS29-206ENST00000549578 SLC18A1P54219 525 aa20.34■□□□□ 0.85
VPS29-206ENST00000549578 DNAJB13P59910 316 aa20.34■□□□□ 0.85
VPS29-206ENST00000549578 CSNK1G2P78368 415 aa20.34■□□□□ 0.85
VPS29-206ENST00000549578 NAA25Q14CX7 972 aa20.34■□□□□ 0.85
VPS29-206ENST00000549578 DEFB110Q30KQ9 67 aa20.34■□□□□ 0.85
VPS29-206ENST00000549578 NXPE4Q6UWF7 544 aa20.34■□□□□ 0.85
VPS29-206ENST00000549578 SLCO4C1Q6ZQN7 724 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms