RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 USP7Q93009 1102 aa13.33□□□□□ -0.27
HDAC7-228ENST00000548938 Q96MT0 163 aa13.33□□□□□ -0.27
HDAC7-228ENST00000548938 FBXL12Q9NXK8 326 aa13.33□□□□□ -0.27
HDAC7-228ENST00000548938 SNX6Q9UNH7 406 aa13.33□□□□□ -0.27
HDAC7-228ENST00000548938 OARD1Q9Y530 152 aa13.33□□□□□ -0.27
HDAC7-228ENST00000548938 NUP214P35658 2090 aaPredicted RBP13.33□□□□□ -0.27
HDAC7-228ENST00000548938 MN1Q10571 1320 aaPredicted RBP13.33□□□□□ -0.28
HDAC7-228ENST00000548938 F5H5T6 163 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 FKBP9O95302 570 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 PRAMEF12O95522 483 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 NUDT6P53370 316 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 CLDN8P56748 225 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 TAF10Q12962 218 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 CLDN19Q8N6F1 224 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 IL17RDQ8NFM7 739 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 DNAJB8Q8NHS0 232 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 CD99L2Q8TCZ2 262 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 EGLN2Q96KS0 407 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 KCNC2Q96PR1 638 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 DPH2Q9BQC3 489 aaPredicted RBP13.33□□□□□ -0.28
HDAC7-228ENST00000548938 CENPOQ9BU64 300 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 FAM126AQ9BYI3 521 aaPredicted RBP13.33□□□□□ -0.28
HDAC7-228ENST00000548938 CCSER2Q9H7U1 834 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 REEP1Q9H902 201 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 TRPS1Q9UHF7 1281 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 PCDHGB6Q9Y5F9 930 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 IDH3BO43837 385 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 TLL1O43897 1013 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 WDR47O94967 919 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 ELP6Q0PNE2 266 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 AGAP6Q5VW22 663 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 OR4F3Q6IEY1 312 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 ZZZ3Q8IYH5 903 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 POP5Q969H6 163 aaKnown RBP13.33□□□□□ -0.28
HDAC7-228ENST00000548938 C8orf48Q96LL4 319 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 CEP295NLQ96MC4 621 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 AGAP4Q96P64 663 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 REXO4Q9GZR2 422 aaKnown RBP13.33□□□□□ -0.28
HDAC7-228ENST00000548938 TRMT13Q9NUP7 481 aaKnown RBP13.33□□□□□ -0.28
HDAC7-228ENST00000548938 PSORS1C1Q9UIG5 152 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 PCDHB8Q9UN66 801 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 A3GALT2U3KPV4 340 aa13.33□□□□□ -0.28
HDAC7-228ENST00000548938 PLXNA4Q9HCM2 1894 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 KRT75O95678 551 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 PDYNP01213 254 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 RPLP0P05388 317 aaKnown RBP13.32□□□□□ -0.28
HDAC7-228ENST00000548938 KRT8P05787 483 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 EBLN1P0CF75 366 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 ITGA1P56199 1179 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 RPS24P62847 133 aaKnown RBP13.32□□□□□ -0.28
HDAC7-228ENST00000548938 FAM189BP81408 668 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 VMACQ2NL98 169 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 TTLL9Q3SXZ7 439 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 PDE12Q6L8Q7 609 aaKnown RBP13.32□□□□□ -0.28
HDAC7-228ENST00000548938 STK40Q8N2I9 435 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 EID2BQ96D98 161 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 HRASLS5Q96KN8 279 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 CHCHD6Q9BRQ6 235 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 MAGEH1Q9H213 219 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 PADI3Q9ULW8 664 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 PRSS21Q9Y6M0 314 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 ZFP37Q9Y6Q3 630 aaPredicted RBP13.32□□□□□ -0.28
HDAC7-228ENST00000548938 CASP8AP2Q9UKL3 1982 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 H7C0S8 307 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 GUCY1B2O75343 617 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 MED26O95402 600 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 F11P03951 625 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 EPB42P16452 691 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 SDC1P18827 310 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 KDELR2P33947 212 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 CRISP3P54108 245 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 CACNG1Q06432 222 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 CLPPQ16740 277 aaPredicted RBP13.32□□□□□ -0.28
HDAC7-228ENST00000548938 SLX4IPQ5VYV7 408 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 FAM151BQ6UXP7 276 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 RNF165Q6ZSG1 346 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 SERPINA11Q86U17 422 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 KBTBD8Q8NFY9 601 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 ZNF675Q8TD23 568 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 CHAC2Q8WUX2 184 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 TTPALQ9BTX7 342 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 NTMT1Q9BV86 223 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 CLPBQ9H078 707 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 C14orf119Q9NWQ9 140 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 EHD3Q9NZN3 535 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 CCDC59Q9P031 241 aaKnown RBP13.32□□□□□ -0.28
HDAC7-228ENST00000548938 N6AMT1Q9Y5N5 214 aa13.32□□□□□ -0.28
HDAC7-228ENST00000548938 CHD5Q8TDI0 1954 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 EVPLLA8MZ36 301 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 E9PQ18 207 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 CBX4O00257 560 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 KCNK5O95279 499 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 PTHP01270 115 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 COL6A1P12109 1028 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 CYP4F2P78329 520 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 ATAD3CQ5T2N8 411 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 PTOV1Q86YD1 416 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 DNAJC22Q8N4W6 341 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 PCSK9Q8NBP7 692 aaKnown RBP13.31□□□□□ -0.28
HDAC7-228ENST00000548938 GGHQ92820 318 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms