RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 CYTH2Q99418 400 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 ZFYVE21Q9BQ24 234 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 NDC1Q9BTX1 674 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 SGPP1Q9BX95 441 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 GPR87Q9BY21 358 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 L2HGDHQ9H9P8 463 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 ENAMQ9NRM1 1142 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 CUEDC1Q9NWM3 386 aaPredicted RBP17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 UTP6Q9NYH9 597 aaKnown RBP17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 DHCR7Q9UBM7 475 aaKnown RBP17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 CTNNAL1Q9UBT7 734 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 NFU1Q9UMS0 254 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 SNX7Q9UNH6 387 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 SRPK3Q9UPE1 567 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 HEATR5BQ9P2D3 2071 aa17.94■□□□□ 0.46
PRPF40B-206ENST00000547764 ACSL3O95573 720 aa17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 PRKAR1AP10644 381 aa17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 RAB10P61026 200 aa17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 RPS15P62841 145 aaKnown RBP17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 MC1RQ01726 317 aa17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 TSNQ15631 228 aaKnown RBP17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 WASHC2DQ5SRD0 308 aa17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 ATP1A1-AS1Q5TC04 95 aa17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 C1orf189Q5VU69 101 aa17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 C16orf46Q6P387 395 aa17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 PCSK4Q6UW60 755 aa17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 FBXL8Q96CD0 374 aa17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 GBP5Q96PP8 586 aa17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 DPH2Q9BQC3 489 aaPredicted RBP17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 FUT8Q9BYC5 575 aa17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 UNKQ9C0B0 810 aaKnown RBP17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 DERL2Q9GZP9 239 aa17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 PCBD2Q9H0N5 130 aa17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 ACTL8Q9H568 366 aa17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 ACSS3Q9H6R3 686 aa17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 TXLNGQ9NUQ3 528 aa17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 FARSAQ9Y285 508 aaKnown RBP17.93■□□□□ 0.46
PRPF40B-206ENST00000547764 FITM1A5D6W6 292 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 H7BY64 318 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 CREG1O75629 220 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 ITGB2P05107 769 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 CAPN1P07384 714 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 RAB40ALP0C0E4 278 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 CCDC166P0CW27 439 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 AGXTP21549 392 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 CCND1P24385 295 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 PTPN4P29074 926 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 ARSFP54793 590 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 RPS18P62269 152 aaKnown RBP17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 CDC20Q12834 499 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 ERV3-1Q14264 604 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 GRM7Q14831 915 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 SLMAPQ14BN4 828 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 CRTC2Q53ET0 693 aaPredicted RBP17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 SOWAHCQ53LP3 525 aaPredicted RBP17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 CAPN13Q6MZZ7 669 aaPredicted RBP17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 FAM198BQ6UWH4 519 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 ADCK2Q7Z695 626 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 CMC1Q7Z7K0 106 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 ADAMTSL2Q86TH1 951 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 OR56A3Q8NH54 315 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 PROKR1Q8TCW9 393 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 ATL1Q8WXF7 558 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 EXTL1Q92935 676 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 PYCR2Q96C36 320 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 PRAP1Q96NZ9 151 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 SYNPO2LQ9H987 977 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 SH2B3Q9UQQ2 575 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 OARD1Q9Y530 152 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 CACNA1GO43497 2377 aa17.92■□□□□ 0.46
PRPF40B-206ENST00000547764 ATMQ13315 3056 aa17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 FER1L5A0AVI2 2057 aa17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 H0YGG7 62 aa17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 HAT1O14929 419 aa17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 ATXN7O15265 892 aaPredicted RBP17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 EIF2S1P05198 315 aaKnown RBP17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 EZRP15311 586 aaKnown RBP17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 CD1DP15813 335 aa17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 NPPBP16860 134 aa17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 ALAS2P22557 587 aa17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 HRH2P25021 359 aa17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 GMPRP36959 345 aa17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 ARF3P61204 181 aaPredicted RBP17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 DCDP81605 110 aaKnown RBP17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 RELAQ04206 551 aa17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 TBR1Q16650 682 aa17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 LINC00303Q3SY05 128 aa17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 TAF1BQ53T94 588 aaPredicted RBP17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 LCTLQ6UWM7 567 aa17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 TTLL10Q6ZVT0 673 aa17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 ENDOVQ8N8Q3 282 aaKnown RBP17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 TTC29Q8NA56 475 aaPredicted RBP17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 UBXN10Q96LJ8 280 aa17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 OR2A5Q96R48 311 aa17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 NLNQ9BYT8 704 aa17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 CUTCQ9NTM9 273 aa17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 TMEM184CQ9NVA4 438 aa17.91■□□□□ 0.46
PRPF40B-206ENST00000547764 HMX2A2RU54 273 aa17.9■□□□□ 0.46
PRPF40B-206ENST00000547764 RECKO95980 971 aa17.9■□□□□ 0.46
PRPF40B-206ENST00000547764 ANXA5P08758 320 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms