RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 PLEKHM3Q6ZWE6 761 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 C1orf186Q6ZWK4 172 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 TAF8Q7Z7C8 310 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 AMIGO1Q86WK6 493 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 CLEC1AQ8NC01 280 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 VANGL1Q8TAA9 524 aaPredicted RBP4.04□□□□□ -1.76
SCAF11-210ENST00000547654 TMEM163Q8TC26 289 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 NUDCD2Q8WVJ2 157 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 TRIB2Q92519 343 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 NEUROG1Q92886 237 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 RAB7BQ96AH8 199 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 SLC22A12Q96S37 553 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 CARD6Q9BX69 1037 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 PRRG4Q9BZD6 226 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 CUEDC2Q9H467 287 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 CATSPERBQ9H7T0 1116 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 TMOD2Q9NZR1 351 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.04□□□□□ -1.761e-9■□□□□ 8.1
SCAF11-210ENST00000547654 RAI2Q9Y5P3 530 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 U3KQV3 271 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 ARHGEF12Q9NZN5 1544 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 FHAD1B1AJZ9 1412 aa4.04□□□□□ -1.76
SCAF11-210ENST00000547654 PRSS51A0A1B0GVH4 220 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 FEZF1A0PJY2 475 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 NEMP2A6NFY4 417 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 TMEM221A6NGB7 291 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 FAM90A26D6RGX4 464 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 WNT9BO14905 357 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 MAGEB2O15479 319 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 ZIC3O60481 467 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 TSC22D2O75157 780 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 SCGB2A1O75556 95 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 CSN3P07498 182 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 EPCAMP16422 314 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 ZNF18P17022 549 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 CHRNB2P17787 502 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 UGT1A6P19224 532 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 UGT1A1P22309 533 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 STX2P32856 288 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 MAGEB1P43366 347 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 NUDT6P53370 316 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 TRA2BP62995 288 aaKnown RBP4.03□□□□□ -1.76
SCAF11-210ENST00000547654 ELP6Q0PNE2 266 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 STXBP2Q15833 593 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 ACKR1Q16570 336 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 CTU2Q2VPK5 515 aaKnown RBP4.03□□□□□ -1.76
SCAF11-210ENST00000547654 MAJINQ3KP22 176 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 LACTB2Q53H82 288 aaPredicted RBP4.03□□□□□ -1.76
SCAF11-210ENST00000547654 WDR88Q6ZMY6 472 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 SYVN1Q86TM6 617 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 RBM23Q86U06 439 aaKnown RBP4.03□□□□□ -1.76
SCAF11-210ENST00000547654 CUZD1Q86UP6 607 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 FAM114A1Q8IWE2 563 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 IQCF1Q8N6M8 205 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 C1orf52Q8N6N3 182 aaKnown RBP4.03□□□□□ -1.76
SCAF11-210ENST00000547654 LEMD2Q8NC56 503 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 SLC26A7Q8TE54 656 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 SSMEM1Q8WWF3 244 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 ARHGAP45Q92619 1136 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 PROX1Q92786 737 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 ALG14Q96F25 216 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 LINGO1Q96FE5 620 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 MYADMQ96S97 322 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 ZNF559Q9BR84 538 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 MMTAG2Q9BU76 263 aaKnown RBP4.03□□□□□ -1.76
SCAF11-210ENST00000547654 ISCUQ9H1K1 167 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 CARD9Q9H257 536 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 KCNN2Q9H2S1 579 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 COQ10BQ9H8M1 238 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 CENPMQ9NSP4 180 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 ZCCHC3Q9NUD5 404 aaKnown RBP4.03□□□□□ -1.76
SCAF11-210ENST00000547654 OSER1Q9NX31 292 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 SOHLH2Q9NX45 425 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 COX16Q9P0S2 106 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 RABL2AQ9UBK7 228 aaPredicted RBP4.03□□□□□ -1.76
SCAF11-210ENST00000547654 CTNNA3Q9UI47 895 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 LAMP5Q9UJQ1 280 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 PCDHA7Q9UN72 937 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 PLA2G4CQ9UP65 541 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 PLEKHA6Q9Y2H5 1048 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 HBS1LQ9Y450 684 aaKnown RBP4.03□□□□□ -1.76
SCAF11-210ENST00000547654 LOXL2Q9Y4K0 774 aa4.03□□□□□ -1.76
SCAF11-210ENST00000547654 ZNF142P52746 1687 aaPredicted RBP4.03□□□□□ -1.76
SCAF11-210ENST00000547654 SUPT6HQ7KZ85 1726 aaKnown RBP4.02□□□□□ -1.77
SCAF11-210ENST00000547654 DENND3A2RUS2 1198 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 TLR4O00206 839 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 ANGPT2O15123 496 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 CLDN3O15551 220 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 RPS6KA5O75582 802 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 DDNO94850 711 aaPredicted RBP4.02□□□□□ -1.77
SCAF11-210ENST00000547654 OR6B1O95007 311 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 GAS8O95995 478 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 ANKRD34CP0C6C1 535 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 PDHBP11177 359 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 CYP2A7P20853 494 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 ACP1P24666 158 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 PBLDP30039 288 aaPredicted RBP4.02□□□□□ -1.77
SCAF11-210ENST00000547654 COMPP49747 757 aaPredicted RBP4.02□□□□□ -1.77
SCAF11-210ENST00000547654 SULT1E1P49888 294 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 RASSF2P50749 326 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms