RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 PDP2Q9P2J9 529 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 PLAGL1Q9UM63 463 aa11.67□□□□□ -0.54
HDAC7-226ENST00000547259 NCF1BA6NI72 391 aaPredicted RBP11.66□□□□□ -0.54
HDAC7-226ENST00000547259 NCF1CA8MVU1 366 aaPredicted RBP11.66□□□□□ -0.54
HDAC7-226ENST00000547259 UBXN8O00124 270 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 MYO1CO00159 1063 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 AGRPO00253 132 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 PPM1DO15297 605 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 PRPF4O43172 522 aaKnown RBP eCLIP11.66□□□□□ -0.54
HDAC7-226ENST00000547259 TYROBPO43914 113 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 RAD1O60671 282 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 SMIM24O75264 130 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 PROCP04070 461 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 GFAPP14136 432 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 NCF1P14598 390 aaPredicted RBP11.66□□□□□ -0.54
HDAC7-226ENST00000547259 POLE2P56282 527 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 AP1S2P56377 157 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 CYP4F2P78329 520 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 TLE1Q04724 770 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 ABHD18Q0P651 414 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 TGFBIQ15582 683 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.66□□□□□ -0.54
HDAC7-226ENST00000547259 MBOAT1Q6ZNC8 495 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 TMEM26Q6ZUK4 368 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 ZNF761Q86XN6 746 aaPredicted RBP11.66□□□□□ -0.54
HDAC7-226ENST00000547259 FAM129CQ86XR2 697 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 NLGN4XQ8N0W4 816 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 NLGN4YQ8NFZ3 816 aaPredicted RBP11.66□□□□□ -0.54
HDAC7-226ENST00000547259 OR9A1PQ8NGU1 263 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 JPH3Q8WXH2 748 aaPredicted RBP11.66□□□□□ -0.54
HDAC7-226ENST00000547259 CCDC138Q96M89 665 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 FAM111AQ96PZ2 611 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 PKP4Q99569 1192 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 RAB11FIP5Q9BXF6 653 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 C12orf65Q9H3J6 166 aaKnown RBP11.66□□□□□ -0.54
HDAC7-226ENST00000547259 GPN2Q9H9Y4 310 aaPredicted RBP11.66□□□□□ -0.54
HDAC7-226ENST00000547259 SLC40A1Q9NP59 571 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 FBXO8Q9NRD0 319 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 SPATA7Q9P0W8 599 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 SLC17A7Q9P2U7 560 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 MID2Q9UJV3 735 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 EMCNQ9ULC0 261 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 ICKQ9UPZ9 632 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 PLLPQ9Y342 182 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 B3GALT1Q9Y5Z6 326 aa11.66□□□□□ -0.54
HDAC7-226ENST00000547259 USP9YO00507 2555 aaPredicted RBP11.66□□□□□ -0.54
HDAC7-226ENST00000547259 TMEM120BA0PK00 339 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 EFCAB7A8K855 629 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 TM9SF1O15321 606 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 PLIN3O60664 434 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 ZWINTO95229 277 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 ANXA5P08758 320 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 MYL2P10916 166 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 LIFP15018 202 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 WT1P19544 449 aaPredicted RBP11.65□□□□□ -0.54
HDAC7-226ENST00000547259 TAC1P20366 129 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 SHMT2P34897 504 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 RPA3P35244 121 aaPredicted RBP11.65□□□□□ -0.54
HDAC7-226ENST00000547259 CASRP41180 1078 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 EPHA4P54764 986 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 CDKL1Q00532 357 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 NFKB2Q00653 900 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 MC2RQ01718 297 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 GRB7Q14451 532 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 COLEC12Q5KU26 742 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 ANKRD42Q8N9B4 389 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 PDPRQ8NCN5 879 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 ARMC2Q8NEN0 867 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 C9orf43Q8TAL5 461 aaPredicted RBP11.65□□□□□ -0.54
HDAC7-226ENST00000547259 RDH11Q8TC12 318 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 APOBEC4Q8WW27 367 aaKnown RBP11.65□□□□□ -0.54
HDAC7-226ENST00000547259 ZFPM2Q8WW38 1151 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 LCN9Q8WX39 176 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 ATL1Q8WXF7 558 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 IL17FQ96PD4 163 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 XKR8Q9H6D3 395 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 WWOXQ9NZC7 414 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 STOX2Q9P2F5 926 aaPredicted RBP11.65□□□□□ -0.54
HDAC7-226ENST00000547259 LNPEPQ9UIQ6 1025 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 PILRAQ9UKJ1 303 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 TMCO1Q9UM00 188 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 PCDHB3Q9Y5E6 796 aa11.65□□□□□ -0.54
HDAC7-226ENST00000547259 LILRA5A6NI73 299 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 ZNF839A8K0R7 811 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 SLC16A8O95907 504 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 SBK3P0C264 359 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 TPBGLP0DKB5 382 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 PKLRP30613 574 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 KCNC1P48547 511 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 RAB28P51157 221 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 PNLIPRP1P54315 467 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 TSTA3Q13630 321 aaPredicted RBP11.64□□□□□ -0.55
HDAC7-226ENST00000547259 UBAP2LQ14157 1087 aaKnown RBP11.64□□□□□ -0.55
HDAC7-226ENST00000547259 MAP7Q14244 749 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 NKAIN2Q5VXU1 208 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 ANKS6Q68DC2 871 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 SULT1C3Q6IMI6 304 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 CYB5D1Q6P9G0 228 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 ARHGAP22Q7Z5H3 698 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 TAX1BP1Q86VP1 789 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms